RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YEL025CP39991 1188 aa13.18□□□□□ -0.3
PTP1YDL230W YER189WP40104 122 aa13.18□□□□□ -0.3
PTP1YDL230W YFL064CP43540 174 aa13.18□□□□□ -0.3
PTP1YDL230W NET1P47035 1189 aa13.18□□□□□ -0.3
PTP1YDL230W TBF1Q02457 562 aa13.18□□□□□ -0.3
PTP1YDL230W YMR321CQ04898 105 aa13.18□□□□□ -0.3
PTP1YDL230W AIM41Q12032 185 aa13.18□□□□□ -0.3
PTP1YDL230W CFT2Q12102 859 aaPredicted RBP13.18□□□□□ -0.3
PTP1YDL230W YBL111CQ3E7Y5 667 aa13.18□□□□□ -0.3
PTP1YDL230W QCR6P00127 147 aa13.17□□□□□ -0.3
PTP1YDL230W CDC19P00549 500 aaKnown RBP13.17□□□□□ -0.3
PTP1YDL230W SSA1P10591 642 aaKnown RBP13.17□□□□□ -0.3
PTP1YDL230W VMA1P17255 1071 aaKnown RBP13.17□□□□□ -0.3
PTP1YDL230W PRP9P19736 530 aaKnown RBP13.17□□□□□ -0.3
PTP1YDL230W DEP1P31385 405 aa13.17□□□□□ -0.3
PTP1YDL230W EUG1P32474 517 aa13.17□□□□□ -0.3
PTP1YDL230W MRX3P38172 270 aa13.17□□□□□ -0.3
PTP1YDL230W HIS2P38635 335 aa13.17□□□□□ -0.3
PTP1YDL230W EAF5P39995 279 aa13.17□□□□□ -0.3
PTP1YDL230W ATG36P46983 293 aa13.17□□□□□ -0.3
PTP1YDL230W CPR7P47103 393 aa13.17□□□□□ -0.3
PTP1YDL230W YJR079WP47126 109 aa13.17□□□□□ -0.3
PTP1YDL230W ORC5P50874 479 aa13.17□□□□□ -0.3
PTP1YDL230W YGL140CP53120 1219 aa13.17□□□□□ -0.3
PTP1YDL230W RIM8P53179 542 aa13.17□□□□□ -0.3
PTP1YDL230W YNL146WP53906 100 aa13.17□□□□□ -0.3
PTP1YDL230W YDR090CQ03193 310 aa13.17□□□□□ -0.3
PTP1YDL230W STE23Q06010 1027 aa13.17□□□□□ -0.3
PTP1YDL230W SPP381P38282 291 aaPredicted RBP13.16□□□□□ -0.3
PTP1YDL230W NPP2P39997 493 aa13.16□□□□□ -0.3
PTP1YDL230W PSY2P40164 858 aa13.16□□□□□ -0.3
PTP1YDL230W RPS7BP48164 190 aaKnown RBP13.16□□□□□ -0.3
PTP1YDL230W RRT6P53117 311 aaPredicted RBP13.16□□□□□ -0.3
PTP1YDL230W SEC21P32074 935 aaKnown RBP13.15□□□□□ -0.3
PTP1YDL230W YTA12P40341 825 aa13.15□□□□□ -0.3
PTP1YDL230W ENV11P53246 860 aa13.15□□□□□ -0.3
PTP1YDL230W TDA9Q04545 1251 aa13.15□□□□□ -0.3
PTP1YDL230W YDR222WQ04925 415 aa13.15□□□□□ -0.3
PTP1YDL230W ARG4P04076 463 aaPredicted RBP13.14□□□□□ -0.31
PTP1YDL230W PKC1P24583 1151 aa13.14□□□□□ -0.31
PTP1YDL230W IRE1P32361 1115 aa13.14□□□□□ -0.31
PTP1YDL230W CSG2P35206 410 aa13.14□□□□□ -0.31
PTP1YDL230W YIL089WP40500 205 aa13.14□□□□□ -0.31
PTP1YDL230W ASN1P49089 572 aaKnown RBP13.14□□□□□ -0.31
PTP1YDL230W PPM1Q04081 328 aa13.14□□□□□ -0.31
PTP1YDL230W IWR1Q07532 353 aaPredicted RBP13.14□□□□□ -0.31
PTP1YDL230W OSW2Q12202 724 aa13.14□□□□□ -0.31
PTP1YDL230W CDC42P19073 191 aa13.13□□□□□ -0.31
PTP1YDL230W CAP1P28495 268 aaKnown RBP13.13□□□□□ -0.31
PTP1YDL230W SWI3P32591 825 aa13.13□□□□□ -0.31
PTP1YDL230W SEC8P32855 1065 aa13.13□□□□□ -0.31
PTP1YDL230W UBC6P33296 250 aaPredicted RBP13.13□□□□□ -0.31
PTP1YDL230W TFC4P33339 1025 aa13.13□□□□□ -0.31
PTP1YDL230W NMD5P46970 1048 aa13.13□□□□□ -0.31
PTP1YDL230W TPO2P53283 614 aa13.13□□□□□ -0.31
PTP1YDL230W YAF9P53930 226 aa13.13□□□□□ -0.31
PTP1YDL230W RNT1Q02555 471 aa13.13□□□□□ -0.31
PTP1YDL230W EEB1Q02891 456 aa13.13□□□□□ -0.31
PTP1YDL230W YMR187CQ03236 431 aa13.13□□□□□ -0.31
PTP1YDL230W RIO1Q12196 484 aaKnown RBP13.13□□□□□ -0.31
PTP1YDL230W CLB1P24868 471 aa13.12□□□□□ -0.31
PTP1YDL230W GCD6P32501 712 aaKnown RBP13.12□□□□□ -0.31
PTP1YDL230W SLD2P34252 453 aa13.12□□□□□ -0.31
PTP1YDL230W SCS3P53012 380 aa13.12□□□□□ -0.31
PTP1YDL230W CUL3P53202 744 aa13.12□□□□□ -0.31
PTP1YDL230W YGR111WP53265 400 aa13.12□□□□□ -0.31
PTP1YDL230W RPA49Q01080 415 aaPredicted RBP13.12□□□□□ -0.31
PTP1YDL230W YLL058WQ12198 575 aa13.12□□□□□ -0.31
PTP1YDL230W PYC1P11154 1178 aaKnown RBP13.11□□□□□ -0.31
PTP1YDL230W RNR1P21524 888 aaKnown RBP13.11□□□□□ -0.31
PTP1YDL230W DBF4P32325 704 aa13.11□□□□□ -0.31
PTP1YDL230W PCS60P38137 543 aaKnown RBP RIP-Chip data13.11□□□□□ -0.31not detected
PTP1YDL230W PBP2P38151 413 aaKnown RBP RIP-Chip data13.11□□□□□ -0.31not detected
PTP1YDL230W ECM2P38241 364 aaKnown RBP13.11□□□□□ -0.31
PTP1YDL230W CCT2P39076 527 aaKnown RBP13.11□□□□□ -0.31
PTP1YDL230W SPC72P39723 622 aa13.11□□□□□ -0.31
PTP1YDL230W YUR1P26725 428 aa13.1□□□□□ -0.31
PTP1YDL230W GYP6P32806 458 aa13.1□□□□□ -0.31
PTP1YDL230W ASG1P40467 964 aa13.1□□□□□ -0.31
PTP1YDL230W ACF4P47129 309 aa13.1□□□□□ -0.31
PTP1YDL230W UTP6Q02354 440 aaKnown RBP13.1□□□□□ -0.31
PTP1YDL230W PNP1Q05788 311 aa13.1□□□□□ -0.31
PTP1YDL230W GPI10P30777 616 aa13.09□□□□□ -0.31
PTP1YDL230W EFT1P32324 842 aaKnown RBP13.09□□□□□ -0.31
PTP1YDL230W YBL055CP34220 418 aaPredicted RBP13.09□□□□□ -0.31
PTP1YDL230W VID24P38263 362 aa13.09□□□□□ -0.31
PTP1YDL230W TIF5P38431 405 aaKnown RBP13.09□□□□□ -0.31
PTP1YDL230W SAK1P38990 1142 aa13.09□□□□□ -0.31
PTP1YDL230W SCD6P45978 349 aaKnown RBP RIP-Chip data13.09□□□□□ -0.31 RIP-Chip
PTP1YDL230W PHO86P46956 311 aa13.09□□□□□ -0.31
PTP1YDL230W PSP2P50109 593 aaKnown RBP13.09□□□□□ -0.31
PTP1YDL230W DRN1P53255 507 aaKnown RBP13.09□□□□□ -0.31
PTP1YDL230W MTG1Q03151 367 aaPredicted RBP13.09□□□□□ -0.31
PTP1YDL230W YMR102CQ03177 834 aa13.09□□□□□ -0.31
PTP1YDL230W JIP4Q03361 876 aa13.09□□□□□ -0.31
PTP1YDL230W TRS130Q03660 1102 aa13.09□□□□□ -0.31
PTP1YDL230W ATG16Q03818 150 aa13.09□□□□□ -0.31
PTP1YDL230W SHS1Q07657 551 aa13.09□□□□□ -0.31
PTP1YDL230W MSC6Q08818 692 aaKnown RBP13.09□□□□□ -0.31
PTP1YDL230W TRM11Q12463 433 aa13.09□□□□□ -0.31
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms