RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	RPD3	P32561	433 aa		6.7	□□□□□ -1.34
RPN5	YDL147W	NIT2	P47016	307 aa		6.7	□□□□□ -1.34
RPN5	YDL147W	BNA2	P47125	453 aa		6.7	□□□□□ -1.34
RPN5	YDL147W	YGR130C	P53278	816 aa		6.7	□□□□□ -1.34
RPN5	YDL147W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.7	□□□□□ -1.34	not detected
RPN5	YDL147W	SIZ1	Q04195	904 aa		6.7	□□□□□ -1.34
RPN5	YDL147W	SST2	P11972	698 aa	Known RBP	6.69	□□□□□ -1.34
RPN5	YDL147W	PWP2	P25635	923 aa	Known RBP	6.69	□□□□□ -1.34
RPN5	YDL147W	ABZ1	P37254	787 aa	Predicted RBP	6.69	□□□□□ -1.34
RPN5	YDL147W	POA1	P38218	177 aa		6.69	□□□□□ -1.34
RPN5	YDL147W	GPP2	P40106	250 aa	Known RBP	6.69	□□□□□ -1.34
RPN5	YDL147W	CCT8	P47079	568 aa	Known RBP	6.69	□□□□□ -1.34
RPN5	YDL147W	SPC105	P53148	917 aa		6.69	□□□□□ -1.34
RPN5	YDL147W	ECM9	Q02202	377 aa		6.69	□□□□□ -1.34
RPN5	YDL147W	MIH1	P23748	554 aa		6.68	□□□□□ -1.34
RPN5	YDL147W	SKN7	P38889	622 aa		6.68	□□□□□ -1.34
RPN5	YDL147W	EMP65	P40085	556 aa		6.68	□□□□□ -1.34
RPN5	YDL147W	ZIP2	P53061	704 aa		6.68	□□□□□ -1.34
RPN5	YDL147W	SLD3	P53135	668 aa		6.68	□□□□□ -1.34
RPN5	YDL147W	TGL2	P54857	326 aa		6.68	□□□□□ -1.34
RPN5	YDL147W	PTA1	Q01329	785 aa	Predicted RBP	6.68	□□□□□ -1.34
RPN5	YDL147W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.68	□□□□□ -1.34	not detected
RPN5	YDL147W	HAL9	Q12180	1030 aa		6.68	□□□□□ -1.34
RPN5	YDL147W	CMP2	P14747	604 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	ATG19	P35193	415 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	VPS24	P36095	224 aa	Known RBP	6.67	□□□□□ -1.34
RPN5	YDL147W	FLR1	P38124	548 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	MAL31	P38156	614 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	BIT2	P38346	545 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	PBP1	P53297	722 aa	Known RBP	6.67	□□□□□ -1.34
RPN5	YDL147W	YNL034W	P53963	612 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	YNL018C	P53976	612 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	YHM2	Q04013	314 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	SSL1	Q04673	461 aa	Predicted RBP	6.67	□□□□□ -1.34
RPN5	YDL147W	CDA1	Q06702	301 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	MCA1	Q08601	432 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	THI21	Q08975	551 aa		6.67	□□□□□ -1.34
RPN5	YDL147W	CYC7	P00045	113 aa		6.66	□□□□□ -1.34
RPN5	YDL147W	GCD1	P09032	578 aa	Predicted RBP	6.66	□□□□□ -1.34
RPN5	YDL147W	DPB3	P27344	201 aa		6.66	□□□□□ -1.34
RPN5	YDL147W	NIC96	P34077	839 aa		6.66	□□□□□ -1.34
RPN5	YDL147W	YKR051W	P36142	418 aa		6.66	□□□□□ -1.34
RPN5	YDL147W	TRZ1	P36159	838 aa	Predicted RBP	6.66	□□□□□ -1.34
RPN5	YDL147W	DUS1	P53759	423 aa	Known RBP	6.66	□□□□□ -1.34
RPN5	YDL147W	CEF1	Q03654	590 aa	Predicted RBP	6.66	□□□□□ -1.34
RPN5	YDL147W	SKY1	Q03656	742 aa		6.66	□□□□□ -1.34
RPN5	YDL147W	YOR352W	Q08816	343 aa		6.66	□□□□□ -1.34
RPN5	YDL147W	RIB2	Q12362	591 aa	Known RBP	6.66	□□□□□ -1.34
RPN5	YDL147W	YKR018C	P36114	725 aa		6.65	□□□□□ -1.35
RPN5	YDL147W	YKR075C	P36155	307 aa		6.65	□□□□□ -1.35
RPN5	YDL147W	GPD1	Q00055	391 aa	Known RBP	6.65	□□□□□ -1.35
RPN5	YDL147W	VPS72	Q03388	795 aa		6.65	□□□□□ -1.35
RPN5	YDL147W	PHM6	Q05637	104 aa		6.65	□□□□□ -1.35
RPN5	YDL147W	RPP2A	P05319	106 aa	Known RBP	6.64	□□□□□ -1.35
RPN5	YDL147W	DAL3	P32459	195 aa		6.64	□□□□□ -1.35
RPN5	YDL147W	HSP78	P33416	811 aa		6.64	□□□□□ -1.35
RPN5	YDL147W	MNN4	P36044	1178 aa		6.64	□□□□□ -1.35
RPN5	YDL147W	YKL133C	P36066	463 aa		6.64	□□□□□ -1.35
RPN5	YDL147W	TAN1	P53072	289 aa	Predicted RBP	6.64	□□□□□ -1.35
RPN5	YDL147W	YPR027C	Q12079	277 aa		6.64	□□□□□ -1.35
RPN5	YDL147W	YLR149C	Q99296	730 aa		6.64	□□□□□ -1.35
RPN5	YDL147W	Q0142	Q9ZZW4	58 aa		6.64	□□□□□ -1.35
RPN5	YDL147W	CYC1	P00044	109 aa	Predicted RBP	6.63	□□□□□ -1.35
RPN5	YDL147W	RIM4	P38741	713 aa		6.63	□□□□□ -1.35
RPN5	YDL147W	MND2	P40577	368 aa		6.63	□□□□□ -1.35
RPN5	YDL147W	SSY5	P47002	699 aa		6.63	□□□□□ -1.35
RPN5	YDL147W	PIP2	P52960	996 aa		6.63	□□□□□ -1.35
RPN5	YDL147W	MET14	Q02196	202 aa		6.63	□□□□□ -1.35
RPN5	YDL147W	ATG16	Q03818	150 aa		6.63	□□□□□ -1.35
RPN5	YDL147W	HFI1	Q12060	488 aa		6.63	□□□□□ -1.35
RPN5	YDL147W	SPE1	P08432	466 aa		6.62	□□□□□ -1.35
RPN5	YDL147W	COX11	P19516	300 aa	Known RBP	6.62	□□□□□ -1.35
RPN5	YDL147W	MTR3	P48240	250 aa	Predicted RBP	6.62	□□□□□ -1.35
RPN5	YDL147W	PCL10	P53124	433 aa		6.62	□□□□□ -1.35
RPN5	YDL147W	ORC4	P54791	529 aa		6.62	□□□□□ -1.35
RPN5	YDL147W	LPX1	Q12405	387 aa	Known RBP	6.62	□□□□□ -1.35
RPN5	YDL147W	GAL1	P04385	528 aa		6.61	□□□□□ -1.35
RPN5	YDL147W	GAL10	P04397	699 aa		6.61	□□□□□ -1.35
RPN5	YDL147W	FBP1	P09201	348 aa		6.61	□□□□□ -1.35
RPN5	YDL147W	HCA4	P20448	770 aa	Known RBP	6.61	□□□□□ -1.35
RPN5	YDL147W	PTP2	P29461	750 aa		6.61	□□□□□ -1.35
RPN5	YDL147W	SEC65	P29478	273 aa		6.61	□□□□□ -1.35
RPN5	YDL147W	HEM12	P32347	362 aa	Predicted RBP	6.61	□□□□□ -1.35
RPN5	YDL147W	HXT6	P39003	570 aa	Known RBP	6.61	□□□□□ -1.35
RPN5	YDL147W	HXT7	P39004	570 aa		6.61	□□□□□ -1.35
RPN5	YDL147W	RNR4	P49723	345 aa	Known RBP	6.61	□□□□□ -1.35
RPN5	YDL147W	ECM16	Q04217	1267 aa	Known RBP	6.61	□□□□□ -1.35
RPN5	YDL147W	PEX15	Q08215	383 aa		6.61	□□□□□ -1.35
RPN5	YDL147W	MED7	Q08278	222 aa		6.61	□□□□□ -1.35
RPN5	YDL147W	TRX2	P22803	104 aa	Known RBP	6.6	□□□□□ -1.35
RPN5	YDL147W	YKU70	P32807	602 aa		6.6	□□□□□ -1.35
RPN5	YDL147W	FUI1	P38196	639 aa		6.6	□□□□□ -1.35
RPN5	YDL147W	YHR078W	P38799	552 aa		6.6	□□□□□ -1.35
RPN5	YDL147W	PZF1	P39933	429 aa		6.6	□□□□□ -1.35
RPN5	YDL147W	SDP1	P40479	209 aa		6.6	□□□□□ -1.35
RPN5	YDL147W	UBX4	P54730	416 aa		6.6	□□□□□ -1.35
RPN5	YDL147W	ORC3	P54790	616 aa		6.6	□□□□□ -1.35
RPN5	YDL147W	BUD21	Q08492	214 aa	Predicted RBP	6.6	□□□□□ -1.35
RPN5	YDL147W	RRP6	Q12149	733 aa	Known RBP	6.6	□□□□□ -1.35
RPN5	YDL147W	RPS21B	Q3E754	87 aa	Known RBP	6.6	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms