RNA–Protein interactions for RNA: YDL136W

RPL35B, Transcript of Ribosomal 60S subunit protein L35B, yeast

Gene RPL35B, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL35B	YDL136W	YBR071W	P38243	211 aa		4.91	□□□□□ -1.62
RPL35B	YDL136W	OAF1	P39720	1047 aa	Predicted RBP	4.91	□□□□□ -1.62
RPL35B	YDL136W	NIT1	P40447	199 aa		4.91	□□□□□ -1.62
RPL35B	YDL136W	COG6	P53959	839 aa		4.91	□□□□□ -1.62
RPL35B	YDL136W	SGD1	Q06132	899 aa		4.91	□□□□□ -1.62
RPL35B	YDL136W	ADY3	Q07732	790 aa		4.91	□□□□□ -1.62
RPL35B	YDL136W	YOL057W	Q08225	711 aa		4.91	□□□□□ -1.62
RPL35B	YDL136W	LRG1	P35688	1017 aa		4.9	□□□□□ -1.63
RPL35B	YDL136W	GRX7	P38068	203 aa		4.9	□□□□□ -1.63
RPL35B	YDL136W	POL12	P38121	705 aa	Predicted RBP	4.9	□□□□□ -1.63
RPL35B	YDL136W	LAM1	P38851	1228 aa		4.9	□□□□□ -1.63
RPL35B	YDL136W	CTF8	P38877	133 aa		4.9	□□□□□ -1.63
RPL35B	YDL136W	YFL052W	P43551	465 aa		4.9	□□□□□ -1.63
RPL35B	YDL136W	PEX8	P53248	589 aa		4.9	□□□□□ -1.63
RPL35B	YDL136W	YTM1	Q12024	460 aa	Predicted RBP	4.9	□□□□□ -1.63
RPL35B	YDL136W	DAL3	P32459	195 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	OMA1	P36163	345 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	TDA3	P38758	523 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	SDP1	P40479	209 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	GZF3	P42944	551 aa	Known RBP	4.89	□□□□□ -1.63
RPL35B	YDL136W	SSY5	P47002	699 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	BNA2	P47125	453 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	YGR153W	P48238	217 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	INP52	P50942	1183 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RPL35B	YDL136W	SNO2	P53823	222 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	ASM4	Q05166	528 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	RPN7	Q06103	429 aa	Known RBP	4.89	□□□□□ -1.63
RPL35B	YDL136W	UPC2	Q12151	913 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	DFG16	Q99234	619 aa		4.89	□□□□□ -1.63
RPL35B	YDL136W	CDC6	P09119	513 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	STE14	P32584	239 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	MNN4	P36044	1178 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	FLR1	P38124	548 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	YHR078W	P38799	552 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	MET12	P46151	657 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	RTS3	P53289	263 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	MRPL22	P53881	309 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	ECM9	Q02202	377 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	DUS4	Q06063	367 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	TRE2	Q08693	809 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	HMI1	Q12039	706 aa		4.88	□□□□□ -1.63
RPL35B	YDL136W	EMC1	P25574	760 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	TFC4	P33339	1025 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	ATG19	P35193	415 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	MEF2	P39677	819 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	CCT5	P40413	562 aa	Known RBP	4.87	□□□□□ -1.63
RPL35B	YDL136W	URM1	P40554	99 aa	Predicted RBP	4.87	□□□□□ -1.63
RPL35B	YDL136W	RET2	P43621	546 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	MNN11	P46985	422 aa	Known RBP	4.87	□□□□□ -1.63
RPL35B	YDL136W	PEX14	P53112	341 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	ARP4	P80428	489 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	YOR352W	Q08816	343 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	DCS2	Q12123	353 aa		4.87	□□□□□ -1.63
RPL35B	YDL136W	HIS5	P07172	385 aa		4.86	□□□□□ -1.63
RPL35B	YDL136W	PLC1	P32383	869 aa		4.86	□□□□□ -1.63
RPL35B	YDL136W	YKR018C	P36114	725 aa		4.86	□□□□□ -1.63
RPL35B	YDL136W	SAK1	P38990	1142 aa		4.86	□□□□□ -1.63
RPL35B	YDL136W	HXT6	P39003	570 aa	Known RBP	4.86	□□□□□ -1.63
RPL35B	YDL136W	HXT7	P39004	570 aa		4.86	□□□□□ -1.63
RPL35B	YDL136W	DUG1	P43616	481 aa	Known RBP	4.86	□□□□□ -1.63
RPL35B	YDL136W	PBP1	P53297	722 aa	Known RBP	4.86	□□□□□ -1.63
RPL35B	YDL136W	SND1	Q04007	877 aa		4.86	□□□□□ -1.63
RPL35B	YDL136W	GPB1	Q08886	897 aa		4.86	□□□□□ -1.63
RPL35B	YDL136W	GPR1	Q12361	961 aa		4.86	□□□□□ -1.63
RPL35B	YDL136W	RPS21B	Q3E754	87 aa	Known RBP	4.86	□□□□□ -1.63
RPL35B	YDL136W	RPS21A	P0C0V8	87 aa	Known RBP	4.85	□□□□□ -1.63
RPL35B	YDL136W	PRP4	P20053	465 aa	Known RBP	4.85	□□□□□ -1.63
RPL35B	YDL136W	SED4	P25365	1065 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	MSS4	P38994	779 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	GPP2	P40106	250 aa	Known RBP	4.85	□□□□□ -1.63
RPL35B	YDL136W	CHA4	P43634	648 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	NIT2	P47016	307 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	PCL10	P53124	433 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	VPS62	P53285	467 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	LEE1	Q02799	301 aa	Known RBP	4.85	□□□□□ -1.63
RPL35B	YDL136W	GCN5	Q03330	439 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	YDR132C	Q03900	495 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	YAP6	Q03935	383 aa		4.85	□□□□□ -1.63
RPL35B	YDL136W	SEC21	P32074	935 aa	Known RBP	4.84	□□□□□ -1.63
RPL35B	YDL136W	MTR3	P48240	250 aa	Predicted RBP	4.84	□□□□□ -1.63
RPL35B	YDL136W	NCS6	P53088	359 aa		4.84	□□□□□ -1.63
RPL35B	YDL136W	YNL034W	P53963	612 aa		4.84	□□□□□ -1.63
RPL35B	YDL136W	YNL018C	P53976	612 aa		4.84	□□□□□ -1.63
RPL35B	YDL136W	TGL2	P54857	326 aa		4.84	□□□□□ -1.63
RPL35B	YDL136W	MUS81	Q04149	632 aa	Predicted RBP	4.84	□□□□□ -1.63
RPL35B	YDL136W	TUB3	P09734	445 aa	Known RBP	4.83	□□□□□ -1.64
RPL35B	YDL136W	AEP2	P22136	580 aa		4.83	□□□□□ -1.64
RPL35B	YDL136W	DID4	P36108	232 aa		4.83	□□□□□ -1.64
RPL35B	YDL136W	MIP6	P38760	659 aa	Known RBP	4.83	□□□□□ -1.64
RPL35B	YDL136W	SSZ1	P38788	538 aa	Known RBP	4.83	□□□□□ -1.64
RPL35B	YDL136W	VHR1	P40522	640 aa		4.83	□□□□□ -1.64
RPL35B	YDL136W	PFA3	P42836	336 aa		4.83	□□□□□ -1.64
RPL35B	YDL136W	BRE5	P53741	515 aa	Known RBP	4.83	□□□□□ -1.64
RPL35B	YDL136W	SLU7	Q02775	382 aa	Known RBP	4.83	□□□□□ -1.64
RPL35B	YDL136W	YHM2	Q04013	314 aa		4.83	□□□□□ -1.64
RPL35B	YDL136W	RXT3	Q07458	294 aa		4.83	□□□□□ -1.64
RPL35B	YDL136W	ACK1	Q07622	623 aa	Predicted RBP	4.83	□□□□□ -1.64
RPL35B	YDL136W	TMA7	Q3E764	64 aa	Known RBP	4.83	□□□□□ -1.64
RPL35B	YDL136W	CDC20	P26309	610 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 176.4 ms