RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W POL31P46957 487 aa6.56□□□□□ -1.36
SIT4YDL047W CUE3P53137 624 aaKnown RBP6.56□□□□□ -1.36
SIT4YDL047W TOF1P53840 1238 aa6.56□□□□□ -1.36
SIT4YDL047W ADA2Q02336 434 aa6.56□□□□□ -1.36
SIT4YDL047W SHS1Q07657 551 aa6.56□□□□□ -1.36
SIT4YDL047W CDC53Q12018 815 aaKnown RBP6.56□□□□□ -1.36
SIT4YDL047W CTF3Q12748 733 aa6.56□□□□□ -1.36
SIT4YDL047W RPS9AO13516 197 aaKnown RBP6.55□□□□□ -1.36
SIT4YDL047W GAL80P04387 435 aa6.55□□□□□ -1.36
SIT4YDL047W CAN1P04817 590 aa6.55□□□□□ -1.36
SIT4YDL047W SSB1P11484 613 aaKnown RBP6.55□□□□□ -1.36
SIT4YDL047W PEX34P25584 144 aa6.55□□□□□ -1.36
SIT4YDL047W SSB2P40150 613 aaKnown RBP6.55□□□□□ -1.36
SIT4YDL047W FYV8P46949 817 aaKnown RBP6.55□□□□□ -1.36
SIT4YDL047W SPC98P53540 846 aa6.55□□□□□ -1.36
SIT4YDL047W SLG1P54867 378 aa6.55□□□□□ -1.36
SIT4YDL047W CWC21Q03375 135 aaKnown RBP6.55□□□□□ -1.36
SIT4YDL047W YDL057WQ07379 328 aa6.55□□□□□ -1.36
SIT4YDL047W NSE1Q07913 336 aa6.55□□□□□ -1.36
SIT4YDL047W SPE3Q12074 293 aaKnown RBP6.55□□□□□ -1.36
SIT4YDL047W SGT2Q12118 346 aaKnown RBP6.55□□□□□ -1.36
SIT4YDL047W ACC1Q00955 2233 aaKnown RBP6.54□□□□□ -1.36
SIT4YDL047W CPA2P03965 1118 aaKnown RBP6.54□□□□□ -1.36
SIT4YDL047W RPL4AP10664 362 aaKnown RBP6.54□□□□□ -1.36
SIT4YDL047W SPO11P23179 398 aa6.54□□□□□ -1.36
SIT4YDL047W HCM1P25364 564 aa6.54□□□□□ -1.36
SIT4YDL047W SGF29P25554 259 aa6.54□□□□□ -1.36
SIT4YDL047W URA1P28272 314 aaPredicted RBP6.54□□□□□ -1.36
SIT4YDL047W RGD1P38339 666 aa6.54□□□□□ -1.36
SIT4YDL047W SNF7P39929 240 aaKnown RBP6.54□□□□□ -1.36
SIT4YDL047W VTC2P43585 828 aa6.54□□□□□ -1.36
SIT4YDL047W ASN1P49089 572 aaKnown RBP6.54□□□□□ -1.36
SIT4YDL047W RPL4BP49626 362 aaKnown RBP6.54□□□□□ -1.36
SIT4YDL047W SFB2P53953 876 aa6.54□□□□□ -1.36
SIT4YDL047W NSE5Q03718 556 aa6.54□□□□□ -1.36
SIT4YDL047W UTP14Q04500 899 aaKnown RBP6.54□□□□□ -1.36
SIT4YDL047W YPL277CQ08989 487 aa6.54□□□□□ -1.36
SIT4YDL047W APM4Q99186 491 aa6.54□□□□□ -1.36
SIT4YDL047W PHO8P11491 566 aa6.53□□□□□ -1.36
SIT4YDL047W TAF13P11747 167 aa6.53□□□□□ -1.36
SIT4YDL047W PDE1P22434 369 aa6.53□□□□□ -1.36
SIT4YDL047W VPS3P23643 1011 aa6.53□□□□□ -1.36
SIT4YDL047W SEG2P34250 1132 aa6.53□□□□□ -1.36
SIT4YDL047W PPS1P38148 807 aa6.53□□□□□ -1.36
SIT4YDL047W MAL33P38157 468 aa6.53□□□□□ -1.36
SIT4YDL047W MAP2P38174 421 aaKnown RBP6.53□□□□□ -1.36
SIT4YDL047W YHR054CP38780 354 aa6.53□□□□□ -1.36
SIT4YDL047W YFL034WP43564 1073 aa6.53□□□□□ -1.36
SIT4YDL047W TAF1P46677 1066 aa6.53□□□□□ -1.36
SIT4YDL047W ATH1P48016 1211 aa6.53□□□□□ -1.36
SIT4YDL047W HIS4P00815 799 aaKnown RBP6.52□□□□□ -1.37
SIT4YDL047W RPS14AP06367 137 aaKnown RBP6.52□□□□□ -1.37
SIT4YDL047W ASP3-2P0CX77 362 aa6.52□□□□□ -1.37
SIT4YDL047W ASP3-3P0CX78 362 aa6.52□□□□□ -1.37
SIT4YDL047W ASP3-4P0CX79 362 aa6.52□□□□□ -1.37
SIT4YDL047W ASP3-1P0CZ17 362 aa6.52□□□□□ -1.37
SIT4YDL047W SLA2P33338 968 aa6.52□□□□□ -1.37
SIT4YDL047W RPS14BP39516 138 aaKnown RBP6.52□□□□□ -1.37
SIT4YDL047W SNU56Q03782 492 aaKnown RBP6.52□□□□□ -1.37
SIT4YDL047W TIF35Q04067 274 aaKnown RBP6.52□□□□□ -1.37
SIT4YDL047W MFB1Q04922 465 aa6.52□□□□□ -1.37
SIT4YDL047W YPR148CQ06523 435 aa6.52□□□□□ -1.37
SIT4YDL047W FMP25Q08023 583 aa6.52□□□□□ -1.37
SIT4YDL047W LEA1Q08963 238 aaPredicted RBP6.52□□□□□ -1.37
SIT4YDL047W TRP2P00899 507 aaKnown RBP6.51□□□□□ -1.37
SIT4YDL047W RGP1P16664 663 aa6.51□□□□□ -1.37
SIT4YDL047W YEL1P34225 687 aa6.51□□□□□ -1.37
SIT4YDL047W PTC4P38089 393 aa6.51□□□□□ -1.37
SIT4YDL047W VPS25P47142 202 aa6.51□□□□□ -1.37
SIT4YDL047W HSH155P49955 971 aaKnown RBP6.51□□□□□ -1.37
SIT4YDL047W PSP1P50896 841 aaKnown RBP6.51□□□□□ -1.37
SIT4YDL047W CAF120P53836 1060 aa6.51□□□□□ -1.37
SIT4YDL047W NOP13P53883 403 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
SIT4YDL047W COG8Q04632 607 aa6.51□□□□□ -1.37
SIT4YDL047W CDD1Q06549 142 aa6.51□□□□□ -1.37
SIT4YDL047W PDH1Q12428 516 aaKnown RBP6.51□□□□□ -1.37
SIT4YDL047W MEX67Q99257 599 aaKnown RBP6.51□□□□□ -1.37
SIT4YDL047W TPK1P06244 397 aa6.5□□□□□ -1.37
SIT4YDL047W DAL7P21826 554 aa6.5□□□□□ -1.37
SIT4YDL047W ISF1P32488 338 aa6.5□□□□□ -1.37
SIT4YDL047W POL12P38121 705 aaPredicted RBP6.5□□□□□ -1.37
SIT4YDL047W NPP2P39997 493 aa6.5□□□□□ -1.37
SIT4YDL047W YHM2Q04013 314 aa6.5□□□□□ -1.37
SIT4YDL047W PEX19Q07418 342 aa6.5□□□□□ -1.37
SIT4YDL047W BMH1P29311 267 aaKnown RBP6.49□□□□□ -1.37
SIT4YDL047W HIR1P32479 840 aa6.49□□□□□ -1.37
SIT4YDL047W ECM32P32644 1121 aaKnown RBP6.49□□□□□ -1.37
SIT4YDL047W TSA1P34760 196 aaKnown RBP6.49□□□□□ -1.37
SIT4YDL047W DEF1P35732 738 aaKnown RBP6.49□□□□□ -1.37
SIT4YDL047W SFB3P38810 929 aa6.49□□□□□ -1.37
SIT4YDL047W FMO1P38866 432 aa6.49□□□□□ -1.37
SIT4YDL047W BIM1P40013 344 aa6.49□□□□□ -1.37
SIT4YDL047W TGL3P40308 642 aa6.49□□□□□ -1.37
SIT4YDL047W LSB3P43603 459 aaKnown RBP6.49□□□□□ -1.37
SIT4YDL047W DAS1P47005 663 aa6.49□□□□□ -1.37
SIT4YDL047W ZAP1P47043 880 aa6.49□□□□□ -1.37
SIT4YDL047W CCM1P48237 864 aaPredicted RBP6.49□□□□□ -1.37
SIT4YDL047W NBP1P52919 319 aaPredicted RBP6.49□□□□□ -1.37
SIT4YDL047W CWC22P53333 577 aaKnown RBP6.49□□□□□ -1.37
SIT4YDL047W TUB4P53378 473 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms