RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	FAP7	Q12055	197 aa	Predicted RBP	7.36	□□□□□ -1.23
SIR2	YDL042C	HIS5	P07172	385 aa		7.35	□□□□□ -1.23
SIR2	YDL042C	HMG1	P12683	1054 aa		7.35	□□□□□ -1.23
SIR2	YDL042C	NPY1	P53164	384 aa		7.35	□□□□□ -1.23
SIR2	YDL042C	SEG2	P34250	1132 aa		7.35	□□□□□ -1.23
SIR2	YDL042C	TOM20	P35180	183 aa		7.35	□□□□□ -1.23
SIR2	YDL042C	SDP1	P40479	209 aa		7.35	□□□□□ -1.23
SIR2	YDL042C	TCB3	Q03640	1545 aa	Known RBP	7.34	□□□□□ -1.23
SIR2	YDL042C	SGS1	P35187	1447 aa		7.34	□□□□□ -1.23
SIR2	YDL042C	CDC6	P09119	513 aa		7.34	□□□□□ -1.23
SIR2	YDL042C	MIH1	P23748	554 aa		7.34	□□□□□ -1.23
SIR2	YDL042C	EMC1	P25574	760 aa		7.34	□□□□□ -1.23
SIR2	YDL042C	YFL052W	P43551	465 aa		7.34	□□□□□ -1.23
SIR2	YDL042C	MTQ2	Q03920	221 aa	Predicted RBP	7.34	□□□□□ -1.23
SIR2	YDL042C	UPC2	Q12151	913 aa		7.34	□□□□□ -1.23
SIR2	YDL042C	SED4	P25365	1065 aa		7.33	□□□□□ -1.24
SIR2	YDL042C	PRP19	P32523	503 aa	Known RBP	7.33	□□□□□ -1.24
SIR2	YDL042C	CTF8	P38877	133 aa		7.33	□□□□□ -1.24
SIR2	YDL042C	CKB2	P38930	258 aa		7.33	□□□□□ -1.24
SIR2	YDL042C	YJR096W	P47137	282 aa		7.33	□□□□□ -1.24
SIR2	YDL042C	UBC9	P50623	157 aa	Predicted RBP	7.33	□□□□□ -1.24
SIR2	YDL042C	ZIP2	P53061	704 aa		7.33	□□□□□ -1.24
SIR2	YDL042C	VPS62	P53285	467 aa		7.33	□□□□□ -1.24
SIR2	YDL042C	HFD1	Q04458	532 aa		7.33	□□□□□ -1.24
SIR2	YDL042C	TY1B-DR4	Q07793	1604 aa		7.33	□□□□□ -1.24
SIR2	YDL042C	RPS13	P05756	151 aa	Known RBP	7.32	□□□□□ -1.24
SIR2	YDL042C	YHR078W	P38799	552 aa		7.32	□□□□□ -1.24
SIR2	YDL042C	CHA4	P43634	648 aa		7.32	□□□□□ -1.24
SIR2	YDL042C	YDR132C	Q03900	495 aa		7.32	□□□□□ -1.24
SIR2	YDL042C	NOP12	Q08208	459 aa	Known RBP	7.32	□□□□□ -1.24
SIR2	YDL042C	TSA1	P34760	196 aa	Known RBP	7.32	□□□□□ -1.24
SIR2	YDL042C	SSY5	P47002	699 aa		7.32	□□□□□ -1.24
SIR2	YDL042C	ACK1	Q07622	623 aa	Predicted RBP	7.32	□□□□□ -1.24
SIR2	YDL042C	GAS1	P22146	559 aa	Known RBP	7.31	□□□□□ -1.24
SIR2	YDL042C	CCR4	P31384	837 aa	Known RBP	7.31	□□□□□ -1.24
SIR2	YDL042C	YKR051W	P36142	418 aa		7.31	□□□□□ -1.24
SIR2	YDL042C	GPP1	P41277	250 aa	Known RBP	7.31	□□□□□ -1.24
SIR2	YDL042C	BNA2	P47125	453 aa		7.31	□□□□□ -1.24
SIR2	YDL042C	SPT20	P50875	604 aa		7.31	□□□□□ -1.24
SIR2	YDL042C	YAP6	Q03935	383 aa		7.31	□□□□□ -1.24
SIR2	YDL042C	SWR1	Q05471	1514 aa		7.31	□□□□□ -1.24
SIR2	YDL042C	NCS6	P53088	359 aa		7.3	□□□□□ -1.24
SIR2	YDL042C	RPN7	Q06103	429 aa	Known RBP	7.3	□□□□□ -1.24
SIR2	YDL042C	YPL277C	Q08989	487 aa		7.3	□□□□□ -1.24
SIR2	YDL042C	Q0142	Q9ZZW4	58 aa		7.3	□□□□□ -1.24
SIR2	YDL042C	CDC20	P26309	610 aa		7.29	□□□□□ -1.24
SIR2	YDL042C	STE14	P32584	239 aa		7.29	□□□□□ -1.24
SIR2	YDL042C	FLR1	P38124	548 aa		7.29	□□□□□ -1.24
SIR2	YDL042C	AIM3	P38266	947 aa	Known RBP	7.29	□□□□□ -1.24
SIR2	YDL042C	YLR149C	Q99296	730 aa		7.29	□□□□□ -1.24
SIR2	YDL042C	SOD2	P00447	233 aa		7.28	□□□□□ -1.24
SIR2	YDL042C	PAF1	P38351	445 aa		7.28	□□□□□ -1.24
SIR2	YDL042C	TMA17	Q12513	150 aa		7.28	□□□□□ -1.24
SIR2	YDL042C	PZF1	P39933	429 aa		7.28	□□□□□ -1.24
SIR2	YDL042C	PRP43	P53131	767 aa	Known RBP	7.28	□□□□□ -1.24
SIR2	YDL042C	CDA2	Q06703	312 aa		7.28	□□□□□ -1.24
SIR2	YDL042C	MRC1	P25588	1096 aa		7.27	□□□□□ -1.25
SIR2	YDL042C	SAK1	P38990	1142 aa		7.27	□□□□□ -1.25
SIR2	YDL042C	FOL1	P53848	824 aa		7.27	□□□□□ -1.25
SIR2	YDL042C	YLR224W	Q05947	369 aa		7.27	□□□□□ -1.25
SIR2	YDL042C	YTM1	Q12024	460 aa	Predicted RBP	7.27	□□□□□ -1.25
SIR2	YDL042C	NPC2	Q12408	173 aa		7.27	□□□□□ -1.25
SIR2	YDL042C	YKR018C	P36114	725 aa		7.26	□□□□□ -1.25
SIR2	YDL042C	MTR3	P48240	250 aa	Predicted RBP	7.26	□□□□□ -1.25
SIR2	YDL042C	TDA3	P38758	523 aa		7.25	□□□□□ -1.25
SIR2	YDL042C	PLB1	P39105	664 aa		7.25	□□□□□ -1.25
SIR2	YDL042C	GZF3	P42944	551 aa	Known RBP	7.25	□□□□□ -1.25
SIR2	YDL042C	RIM8	P53179	542 aa		7.25	□□□□□ -1.25
SIR2	YDL042C	SWM1	Q12379	170 aa		7.25	□□□□□ -1.25
SIR2	YDL042C	VHR1	P40522	640 aa		7.25	□□□□□ -1.25
SIR2	YDL042C	RET2	P43621	546 aa		7.25	□□□□□ -1.25
SIR2	YDL042C	MUS81	Q04149	632 aa	Predicted RBP	7.25	□□□□□ -1.25
SIR2	YDL042C	KCS1	Q12494	1050 aa		7.25	□□□□□ -1.25
SIR2	YDL042C	SEC21	P32074	935 aa	Known RBP	7.24	□□□□□ -1.25
SIR2	YDL042C	MNN4	P36044	1178 aa		7.24	□□□□□ -1.25
SIR2	YDL042C	OAF1	P39720	1047 aa	Predicted RBP	7.24	□□□□□ -1.25
SIR2	YDL042C	NIT1	P40447	199 aa		7.24	□□□□□ -1.25
SIR2	YDL042C	YJR120W	P47157	116 aa		7.24	□□□□□ -1.25
SIR2	YDL042C	YGR153W	P48238	217 aa		7.24	□□□□□ -1.25
SIR2	YDL042C	PCL10	P53124	433 aa		7.24	□□□□□ -1.25
SIR2	YDL042C	PRP6	P19735	899 aa	Predicted RBP	7.23	□□□□□ -1.25
SIR2	YDL042C	EUG1	P32474	517 aa		7.23	□□□□□ -1.25
SIR2	YDL042C	MSS4	P38994	779 aa		7.23	□□□□□ -1.25
SIR2	YDL042C	TOD6	P34219	525 aa		7.22	□□□□□ -1.25
SIR2	YDL042C	PFA3	P42836	336 aa		7.22	□□□□□ -1.25
SIR2	YDL042C	ASI2	P53895	289 aa		7.22	□□□□□ -1.25
SIR2	YDL042C	PKH1	Q03407	766 aa		7.22	□□□□□ -1.25
SIR2	YDL042C	DNA2	P38859	1522 aa		7.22	□□□□□ -1.25
SIR2	YDL042C	TUB3	P09734	445 aa	Known RBP	7.22	□□□□□ -1.25
SIR2	YDL042C	MIP6	P38760	659 aa	Known RBP	7.22	□□□□□ -1.25
SIR2	YDL042C	CCT5	P40413	562 aa	Known RBP	7.22	□□□□□ -1.25
SIR2	YDL042C	ASM4	Q05166	528 aa		7.22	□□□□□ -1.25
SIR2	YDL042C	PEX19	Q07418	342 aa		7.22	□□□□□ -1.25
SIR2	YDL042C	TRE2	Q08693	809 aa		7.22	□□□□□ -1.25
SIR2	YDL042C	NGG1	P32494	702 aa		7.21	□□□□□ -1.26
SIR2	YDL042C	YBR071W	P38243	211 aa		7.21	□□□□□ -1.26
SIR2	YDL042C	MNN11	P46985	422 aa	Known RBP	7.21	□□□□□ -1.26
SIR2	YDL042C	GPR1	Q12361	961 aa		7.21	□□□□□ -1.26
SIR2	YDL042C	RNQ1	P25367	405 aa		7.2	□□□□□ -1.26
SIR2	YDL042C	AVT1	P47082	602 aa		7.2	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms