RNA–Protein interactions for RNA: YCR001W

YCR001W, Transcript of Dubious open reading frame, yeast

Gene YCR001W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR001W	YCR001W	YJL163C	P46996	555 aa		4.6	□□□□□ -1.67
YCR001W	YCR001W	SSY5	P47002	699 aa		4.6	□□□□□ -1.67
YCR001W	YCR001W	AMA1	P50082	593 aa		4.6	□□□□□ -1.67
YCR001W	YCR001W	PRC1	P00729	532 aa		4.59	□□□□□ -1.67
YCR001W	YCR001W	BDF2	Q07442	638 aa		4.59	□□□□□ -1.67
YCR001W	YCR001W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
YCR001W	YCR001W	RAD4	P14736	754 aa		4.58	□□□□□ -1.68
YCR001W	YCR001W	HSP60	P19882	572 aa	Known RBP	4.58	□□□□□ -1.68
YCR001W	YCR001W	YCL002C	P25565	263 aa		4.58	□□□□□ -1.68
YCR001W	YCR001W	SAP190	P36123	1033 aa		4.58	□□□□□ -1.68
YCR001W	YCR001W	PCL5	P38794	229 aa		4.58	□□□□□ -1.68
YCR001W	YCR001W	UBP6	P43593	499 aa	Known RBP	4.58	□□□□□ -1.68
YCR001W	YCR001W	TAD1	P53065	400 aa		4.58	□□□□□ -1.68
YCR001W	YCR001W	NRG1	Q03125	231 aa		4.58	□□□□□ -1.68
YCR001W	YCR001W	LRS4	Q04087	347 aa	Known RBP	4.58	□□□□□ -1.68
YCR001W	YCR001W	YLR415C	O13578	112 aa		4.57	□□□□□ -1.68
YCR001W	YCR001W	EMC3	P36039	253 aa		4.57	□□□□□ -1.68
YCR001W	YCR001W	PFA3	P42836	336 aa		4.57	□□□□□ -1.68
YCR001W	YCR001W	RSC3	Q06639	885 aa		4.57	□□□□□ -1.68
YCR001W	YCR001W	GGA2	P38817	585 aa	Known RBP	4.56	□□□□□ -1.68
YCR001W	YCR001W	YIR042C	P40586	236 aa		4.56	□□□□□ -1.68
YCR001W	YCR001W	GYP8	P43570	497 aa		4.56	□□□□□ -1.68
YCR001W	YCR001W	YGR125W	P53273	1036 aa		4.56	□□□□□ -1.68
YCR001W	YCR001W	YGR283C	P53336	341 aa	Predicted RBP	4.56	□□□□□ -1.68
YCR001W	YCR001W	YDL124W	Q07551	312 aa	Known RBP	4.56	□□□□□ -1.68
YCR001W	YCR001W	IRC13	Q08630	104 aa		4.56	□□□□□ -1.68
YCR001W	YCR001W	CIT1	P00890	479 aa		4.55	□□□□□ -1.68
YCR001W	YCR001W	TOM70	P07213	617 aa	Known RBP	4.55	□□□□□ -1.68
YCR001W	YCR001W	GFA1	P14742	717 aa	Known RBP	4.55	□□□□□ -1.68
YCR001W	YCR001W	TDP1	P38319	544 aa		4.55	□□□□□ -1.68
YCR001W	YCR001W	HUL4	P40985	892 aa		4.55	□□□□□ -1.68
YCR001W	YCR001W	TIM54	P47045	478 aa		4.55	□□□□□ -1.68
YCR001W	YCR001W	DAM1	P53267	343 aa		4.55	□□□□□ -1.68
YCR001W	YCR001W	RIA1	P53893	1110 aa		4.55	□□□□□ -1.68
YCR001W	YCR001W	SUT2	Q12286	268 aa		4.55	□□□□□ -1.68
YCR001W	YCR001W	CDC43	P18898	376 aa		4.54	□□□□□ -1.68
YCR001W	YCR001W	PEX2	P32800	271 aa		4.54	□□□□□ -1.68
YCR001W	YCR001W	HIS7	P33734	552 aa	Known RBP	4.54	□□□□□ -1.68
YCR001W	YCR001W	LAT1	P12695	482 aa	Known RBP	4.53	□□□□□ -1.68
YCR001W	YCR001W	PPZ2	P33329	710 aa		4.53	□□□□□ -1.68
YCR001W	YCR001W	SET5	P38890	526 aa	Known RBP	4.53	□□□□□ -1.68
YCR001W	YCR001W	VPS73	P53142	486 aa	Known RBP	4.53	□□□□□ -1.68
YCR001W	YCR001W	TAF8	Q03750	510 aa		4.53	□□□□□ -1.68
YCR001W	YCR001W	YDR514C	Q04408	483 aa		4.53	□□□□□ -1.68
YCR001W	YCR001W	REH1	Q06709	432 aa		4.53	□□□□□ -1.68
YCR001W	YCR001W	THI21	Q08975	551 aa		4.53	□□□□□ -1.68
YCR001W	YCR001W	TGL5	Q12043	749 aa		4.53	□□□□□ -1.68
YCR001W	YCR001W	NDJ1	Q12366	352 aa		4.53	□□□□□ -1.68
YCR001W	YCR001W	KIN3	P22209	435 aa		4.52	□□□□□ -1.69
YCR001W	YCR001W	CBR1	P38626	284 aa	Known RBP	4.52	□□□□□ -1.69
YCR001W	YCR001W	HSV2	P50079	448 aa	Predicted RBP	4.52	□□□□□ -1.69
YCR001W	YCR001W	HCA4	P20448	770 aa	Known RBP	4.51	□□□□□ -1.69
YCR001W	YCR001W	BET3	P36149	193 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	BCD1	P38772	366 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	HOS4	P40480	1083 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	SHR5	P41912	237 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	TAH11	P47112	604 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	MTR3	P48240	250 aa	Predicted RBP	4.51	□□□□□ -1.69
YCR001W	YCR001W	ASM4	Q05166	528 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	SGO1	Q08490	590 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	FLC1	Q08967	793 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	BNR1	P40450	1375 aa		4.51	□□□□□ -1.69
YCR001W	YCR001W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
YCR001W	YCR001W	SIC1	P38634	284 aa		4.5	□□□□□ -1.69
YCR001W	YCR001W	FMP52	P40008	231 aa		4.5	□□□□□ -1.69
YCR001W	YCR001W	ALG2	P43636	503 aa		4.5	□□□□□ -1.69
YCR001W	YCR001W	SSL2	Q00578	843 aa		4.5	□□□□□ -1.69
YCR001W	YCR001W	MET7	Q08645	548 aa		4.5	□□□□□ -1.69
YCR001W	YCR001W	GPR1	Q12361	961 aa		4.5	□□□□□ -1.69
YCR001W	YCR001W	YBR182C-A	Q8TGU6	64 aa		4.5	□□□□□ -1.69
YCR001W	YCR001W	MET6	P05694	767 aa	Known RBP	4.49	□□□□□ -1.69
YCR001W	YCR001W	YBR259W	P38338	688 aa		4.49	□□□□□ -1.69
YCR001W	YCR001W	YHR020W	P38708	688 aa	Known RBP	4.49	□□□□□ -1.69
YCR001W	YCR001W	RLP7	P40693	322 aa	Known RBP	4.49	□□□□□ -1.69
YCR001W	YCR001W	ZDS1	P50111	915 aa	Known RBP	4.49	□□□□□ -1.69
YCR001W	YCR001W	UBC11	P52492	156 aa		4.49	□□□□□ -1.69
YCR001W	YCR001W	ATG11	Q12527	1178 aa		4.49	□□□□□ -1.69
YCR001W	YCR001W	DIF1	O13577	133 aa		4.48	□□□□□ -1.69
YCR001W	YCR001W	RIX1	P38883	763 aa	Predicted RBP	4.48	□□□□□ -1.69
YCR001W	YCR001W	TEL2	P53038	688 aa		4.48	□□□□□ -1.69
YCR001W	YCR001W	ZIP2	P53061	704 aa		4.48	□□□□□ -1.69
YCR001W	YCR001W	TUB1	P09733	447 aa	Known RBP	4.47	□□□□□ -1.69
YCR001W	YCR001W	RTA1	P53047	317 aa		4.47	□□□□□ -1.69
YCR001W	YCR001W	TEX1	P53851	422 aa	Known RBP	4.47	□□□□□ -1.69
YCR001W	YCR001W	ATP25	Q03153	612 aa		4.47	□□□□□ -1.69
YCR001W	YCR001W	GAD1	Q04792	585 aa		4.47	□□□□□ -1.69
YCR001W	YCR001W	PER1	P25625	357 aa		4.46	□□□□□ -1.7
YCR001W	YCR001W	HIR1	P32479	840 aa		4.46	□□□□□ -1.7
YCR001W	YCR001W	SPC29	P33419	253 aa		4.46	□□□□□ -1.7
YCR001W	YCR001W	RSP5	P39940	809 aa	Known RBP	4.46	□□□□□ -1.7
YCR001W	YCR001W	YIL166C	P40445	542 aa		4.46	□□□□□ -1.7
YCR001W	YCR001W	SNM1	P40993	198 aa		4.46	□□□□□ -1.7
YCR001W	YCR001W	BAP3	P41815	604 aa		4.46	□□□□□ -1.7
YCR001W	YCR001W	HXT16	P47185	567 aa		4.46	□□□□□ -1.7
YCR001W	YCR001W	HUL5	P53119	910 aa		4.46	□□□□□ -1.7
YCR001W	YCR001W	CAN1	P04817	590 aa		4.45	□□□□□ -1.7
YCR001W	YCR001W	DMC1	P25453	334 aa		4.45	□□□□□ -1.7
YCR001W	YCR001W	REV7	P38927	245 aa		4.45	□□□□□ -1.7
YCR001W	YCR001W	YJL049W	P47048	450 aa		4.45	□□□□□ -1.7
YCR001W	YCR001W	YBP2	P53169	641 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms