RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C SHC1P39000 512 aa6.11□□□□□ -1.43
PDB1YBR221C SPC72P39723 622 aa6.11□□□□□ -1.43
PDB1YBR221C SIT1P39980 628 aa6.11□□□□□ -1.43
PDB1YBR221C PSY2P40164 858 aa6.11□□□□□ -1.43
PDB1YBR221C TOK1P40310 691 aa6.11□□□□□ -1.43
PDB1YBR221C YTA6P40328 754 aa6.11□□□□□ -1.43
PDB1YBR221C RAD26P40352 1085 aa6.11□□□□□ -1.43
PDB1YBR221C FIG4P42837 879 aa6.11□□□□□ -1.43
PDB1YBR221C UPF3P48412 387 aaKnown RBP6.11□□□□□ -1.43
PDB1YBR221C SPO1P53541 631 aa6.11□□□□□ -1.43
PDB1YBR221C VPS9P54787 451 aa6.11□□□□□ -1.43
PDB1YBR221C EAR1Q03212 550 aa6.11□□□□□ -1.43
PDB1YBR221C ADI1Q03677 179 aa6.11□□□□□ -1.43
PDB1YBR221C BLS1Q06071 122 aa6.11□□□□□ -1.43
PDB1YBR221C CTI6Q08923 506 aa6.11□□□□□ -1.43
PDB1YBR221C YTM1Q12024 460 aaPredicted RBP6.11□□□□□ -1.43
PDB1YBR221C PDX1P16451 410 aa6.1□□□□□ -1.43
PDB1YBR221C AAC3P18238 307 aa6.1□□□□□ -1.43
PDB1YBR221C MCM3P24279 971 aaKnown RBP6.1□□□□□ -1.43
PDB1YBR221C VBA3P25594 458 aa6.1□□□□□ -1.43
PDB1YBR221C MCM5P29496 775 aaKnown RBP6.1□□□□□ -1.43
PDB1YBR221C SMY1P32364 656 aaKnown RBP6.1□□□□□ -1.43
PDB1YBR221C PRP19P32523 503 aaKnown RBP6.1□□□□□ -1.43
PDB1YBR221C TFB1P32776 642 aa6.1□□□□□ -1.43
PDB1YBR221C ABD1P32783 436 aaPredicted RBP6.1□□□□□ -1.43
PDB1YBR221C KTR2P33550 425 aa6.1□□□□□ -1.43
PDB1YBR221C SEG2P34250 1132 aa6.1□□□□□ -1.43
PDB1YBR221C MAC1P35192 417 aa6.1□□□□□ -1.43
PDB1YBR221C BYE1P36106 594 aa6.1□□□□□ -1.43
PDB1YBR221C FTH1P38310 465 aa6.1□□□□□ -1.43
PDB1YBR221C HSM3P38348 480 aa6.1□□□□□ -1.43
PDB1YBR221C FUN12P39730 1002 aaKnown RBP6.1□□□□□ -1.43
PDB1YBR221C QRI7P43122 407 aa6.1□□□□□ -1.43
PDB1YBR221C YAP1802P53309 568 aa6.1□□□□□ -1.43
PDB1YBR221C RAT1Q02792 1006 aaKnown RBP6.1□□□□□ -1.43
PDB1YBR221C PRP42Q03776 544 aaKnown RBP6.1□□□□□ -1.43
PDB1YBR221C ATG38Q05789 226 aaKnown RBP6.1□□□□□ -1.43
PDB1YBR221C MLH2Q07980 695 aa6.1□□□□□ -1.43
PDB1YBR221C APL4Q12028 832 aa6.1□□□□□ -1.43
PDB1YBR221C RKM4Q12504 494 aa6.1□□□□□ -1.43
PDB1YBR221C RPB4P20433 221 aaPredicted RBP6.09□□□□□ -1.43
PDB1YBR221C MRPL25P23369 157 aa6.09□□□□□ -1.43
PDB1YBR221C ICL1P28240 557 aaPredicted RBP6.09□□□□□ -1.43
PDB1YBR221C ATG19P35193 415 aa6.09□□□□□ -1.43
PDB1YBR221C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
PDB1YBR221C MUD2P36084 527 aaKnown RBP6.09□□□□□ -1.43
PDB1YBR221C PIC2P40035 300 aa6.09□□□□□ -1.43
PDB1YBR221C LEM3P42838 414 aa6.09□□□□□ -1.43
PDB1YBR221C VPS53P47061 822 aa6.09□□□□□ -1.43
PDB1YBR221C YJR096WP47137 282 aa6.09□□□□□ -1.43
PDB1YBR221C ENT3P47160 408 aa6.09□□□□□ -1.43
PDB1YBR221C MNP1P53163 194 aaPredicted RBP6.09□□□□□ -1.43
PDB1YBR221C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
PDB1YBR221C ARP9Q05123 467 aa6.09□□□□□ -1.43
PDB1YBR221C MRL1Q06815 381 aa6.09□□□□□ -1.43
PDB1YBR221C CUE5Q08412 411 aaKnown RBP6.09□□□□□ -1.43
PDB1YBR221C RMP1Q12530 201 aa6.09□□□□□ -1.43
PDB1YBR221C ILS1P09436 1072 aaKnown RBP6.08□□□□□ -1.44
PDB1YBR221C PMS1P14242 873 aa6.08□□□□□ -1.44
PDB1YBR221C MSH3P25336 1018 aa6.08□□□□□ -1.44
PDB1YBR221C YEL1P34225 687 aa6.08□□□□□ -1.44
PDB1YBR221C SEA4P38164 1038 aa6.08□□□□□ -1.44
PDB1YBR221C OAF1P39720 1047 aaPredicted RBP6.08□□□□□ -1.44
PDB1YBR221C TPA1P40032 644 aaKnown RBP6.08□□□□□ -1.44
PDB1YBR221C KAP123P40069 1113 aaKnown RBP6.08□□□□□ -1.44
PDB1YBR221C EMP65P40085 556 aa6.08□□□□□ -1.44
PDB1YBR221C BUD27P43573 796 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
PDB1YBR221C ZIP2P53061 704 aa6.08□□□□□ -1.44
PDB1YBR221C MET13P53128 600 aa6.08□□□□□ -1.44
PDB1YBR221C HOT1Q03213 719 aa6.08□□□□□ -1.44
PDB1YBR221C YCG1Q06680 1035 aa6.08□□□□□ -1.44
PDB1YBR221C SFI1Q12369 946 aa6.08□□□□□ -1.44
PDB1YBR221C YDL206WQ12424 762 aa6.08□□□□□ -1.44
PDB1YBR221C YBL029C-AQ3E756 94 aa6.08□□□□□ -1.44
PDB1YBR221C SEC3P33332 1336 aaKnown RBP6.07□□□□□ -1.44
PDB1YBR221C MST1P07236 462 aa6.07□□□□□ -1.44
PDB1YBR221C LPD1P09624 499 aaKnown RBP6.07□□□□□ -1.44
PDB1YBR221C MET8P15807 274 aa6.07□□□□□ -1.44
PDB1YBR221C DAL7P21826 554 aa6.07□□□□□ -1.44
PDB1YBR221C PUF4P25339 888 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
PDB1YBR221C HEM12P32347 362 aaPredicted RBP6.07□□□□□ -1.44
PDB1YBR221C YKU70P32807 602 aa6.07□□□□□ -1.44
PDB1YBR221C MDL1P33310 695 aa6.07□□□□□ -1.44
PDB1YBR221C MDJ1P35191 511 aa6.07□□□□□ -1.44
PDB1YBR221C MIC60P36112 540 aa6.07□□□□□ -1.44
PDB1YBR221C BIT2P38346 545 aa6.07□□□□□ -1.44
PDB1YBR221C CKB2P38930 258 aa6.07□□□□□ -1.44
PDB1YBR221C FKH1P40466 484 aa6.07□□□□□ -1.44
PDB1YBR221C VHR1P40522 640 aa6.07□□□□□ -1.44
PDB1YBR221C MDE1P47095 244 aa6.07□□□□□ -1.44
PDB1YBR221C PCL10P53124 433 aa6.07□□□□□ -1.44
PDB1YBR221C ULP1Q02724 621 aa6.07□□□□□ -1.44
PDB1YBR221C CIA1Q05583 330 aa6.07□□□□□ -1.44
PDB1YBR221C RGA2Q06407 1009 aa6.07□□□□□ -1.44
PDB1YBR221C HDA3Q06623 655 aa6.07□□□□□ -1.44
PDB1YBR221C TRP2P00899 507 aaKnown RBP6.06□□□□□ -1.44
PDB1YBR221C RPS6AP0CX37 236 aaKnown RBP6.06□□□□□ -1.44
PDB1YBR221C RPS6BP0CX38 236 aaPredicted RBP6.06□□□□□ -1.44
PDB1YBR221C HOM2P13663 365 aaKnown RBP6.06□□□□□ -1.44
PDB1YBR221C GFA1P14742 717 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms