RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 COL19A1Q14993 1142 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 ECM1Q16610 540 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 METTL16Q86W50 562 aaKnown RBP4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 CERS3Q8IU89 383 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 PHTF2Q8N3S3 785 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 RNF34Q969K3 372 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 NACC1Q96RE7 527 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 PIF1Q9H611 641 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 ZSWIM4Q9H7M6 989 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 AVENQ9NQS1 362 aaPredicted RBP4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 PARP2Q9UGN5 583 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 RAB11FIP3O75154 756 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 ALAS2P22557 587 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 ZNF76P36508 570 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 PDE3BQ13370 1112 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 AAMPQ13685 434 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 RSPO4Q2I0M5 234 aaPredicted RBP4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 ESCO1Q5FWF5 840 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 LDLRAD1Q5T700 205 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 SDE2Q6IQ49 451 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 TSEN2Q8NCE0 465 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 CCDC85AQ96PX6 553 aaPredicted RBP4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 TGIF2Q9GZN2 237 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 GOLGA2P5Q9HBQ8 144 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 PCDHGC4Q9Y5F7 938 aa4.72□□□□□ -1.65
HERPUD1-211ENST00000566550 SBNO2Q9Y2G9 1366 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 hCG_2014768A0A024R1R8 64 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 TLDC2A0PJX2 215 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 ZBTB7BO15156 539 aaPredicted RBP4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 DYRK3O43781 588 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 BNIP3LO60238 219 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 SORBS3O60504 671 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 DKK1O94907 266 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 THBS1P07996 1170 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 MPSTP25325 297 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 FANCCQ00597 558 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 UBAP2LQ14157 1087 aaKnown RBP4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 BMS1Q14692 1282 aaKnown RBP4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 HELQQ8TDG4 1101 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 ZNF526Q8TF50 670 aaPredicted RBP4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 OSBPL3Q9H4L5 887 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 PRR12Q9ULL5 1215 aa4.71□□□□□ -1.66
HERPUD1-211ENST00000566550 TREHO43280 583 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 PTCD1O75127 700 aaKnown RBP4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 PRPF40AO75400 957 aaKnown RBP4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 FAM13AO94988 1023 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 ATP2B2Q01814 1243 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 FMR1Q06787 632 aaKnown RBP eCLIP4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 C4orf17Q53FE4 359 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 NKAPLQ5M9Q1 402 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 NLRP8Q86W28 1048 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 RHBDD1Q8TEB9 315 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 XAGE2Q96GT9 111 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 GPATCH3Q96I76 525 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 SETDB2Q96T68 719 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 RBCK1Q9BYM8 510 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 CRISPLD1Q9H336 500 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 RAB6BQ9NRW1 208 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 NDFIP2Q9NV92 336 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 WWC3Q9ULE0 1092 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 INPP5FQ9Y2H2 1132 aa4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.7□□□□□ -1.66
HERPUD1-211ENST00000566550 ATXN7O15265 892 aaPredicted RBP4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 ITGAEP38570 1179 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 SCTRP47872 440 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 IGBP1P78318 339 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 TRIM28Q13263 835 aaKnown RBP4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 LRP8Q14114 963 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 PRSS36Q5K4E3 855 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 FAM182BQ5T319 152 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 VTI1AQ96AJ9 217 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 ZCCHC2Q9C0B9 1178 aaKnown RBP4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 TPSG1Q9NRR2 321 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 NLRP2Q9NX02 1062 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 KLHL42Q9P2K6 505 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 CHIC2Q9UKJ5 165 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 PCDHGB7Q9Y5F8 929 aa4.69□□□□□ -1.66
HERPUD1-211ENST00000566550 IL2RAP01589 272 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 WEE1P30291 646 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 PLCB3Q01970 1234 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 ARID5AQ03989 594 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 EHHADHQ08426 723 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 PTPROQ16827 1216 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 TMC4Q7Z404 712 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 NLGN1Q8N2Q7 840 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 SLC43A3Q8NBI5 491 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 CHMP7Q8WUX9 453 aaPredicted RBP4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 TRIM11Q96F44 468 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 SPACA7Q96KW9 195 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 METTL5Q9NRN9 209 aaKnown RBP4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 DMGDHQ9UI17 866 aaKnown RBP4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 TBX22Q9Y458 520 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 GJA3Q9Y6H8 435 aa4.68□□□□□ -1.66
HERPUD1-211ENST00000566550 PNMA6FA0A0J9YX94 578 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 STK10O94804 968 aaKnown RBP4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 H2AFB1P0C5Y9 115 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 H2AFB2P0C5Z0 115 aa4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 IBSPP21815 317 aaPredicted RBP4.67□□□□□ -1.66
HERPUD1-211ENST00000566550 TXKP42681 527 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms