RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 POLA2Q14181 598 aa13.32□□□□□ -0.28
NXF1-211ENST00000531709 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
NXF1-211ENST00000531709 CBX8Q9HC52 389 aa13.32□□□□□ -0.28
NXF1-211ENST00000531709 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.32□□□□□ -0.283e-8■■■■□ 20
NXF1-211ENST00000531709 TBX22Q9Y458 520 aa13.32□□□□□ -0.28
NXF1-211ENST00000531709 V9GYY5 206 aaPredicted RBP13.32□□□□□ -0.28
NXF1-211ENST00000531709 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
NXF1-211ENST00000531709 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
NXF1-211ENST00000531709 TTC14Q96N46 770 aa13.32□□□□□ -0.28
NXF1-211ENST00000531709 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
NXF1-211ENST00000531709 GCP02774 474 aa13.31□□□□□ -0.28
NXF1-211ENST00000531709 TRDNQ13061 729 aa13.31□□□□□ -0.28
NXF1-211ENST00000531709 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
NXF1-211ENST00000531709 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
NXF1-211ENST00000531709 PDIA4P13667 645 aaKnown RBP13.31□□□□□ -0.28
NXF1-211ENST00000531709 APOBRQ0VD83 1088 aa13.31□□□□□ -0.28
NXF1-211ENST00000531709 CEP57L1Q8IYX8 460 aa13.31□□□□□ -0.28
NXF1-211ENST00000531709 CCDC94Q9BW85 323 aaPredicted RBP13.31□□□□□ -0.28
NXF1-211ENST00000531709 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
NXF1-211ENST00000531709 HMG20BQ9P0W2 317 aa13.31□□□□□ -0.28
NXF1-211ENST00000531709 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
NXF1-211ENST00000531709 NR1I2O75469 434 aa13.31□□□□□ -0.28
NXF1-211ENST00000531709 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
NXF1-211ENST00000531709 NRBP1Q9UHY1 535 aa13.31□□□□□ -0.28
NXF1-211ENST00000531709 ATP2B1P20020 1258 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 PTPN14Q15678 1187 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 LMBR1LQ6UX01 489 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 A0A087WWV3 80 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 NFXL1Q6ZNB6 911 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 ZNF589Q86UQ0 364 aaPredicted RBP13.3□□□□□ -0.28
NXF1-211ENST00000531709 FAM177A1Q8N128 213 aaPredicted RBP13.3□□□□□ -0.28
NXF1-211ENST00000531709 DBNDD2Q9BQY9 259 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
NXF1-211ENST00000531709 EPB41L2O43491 1005 aaKnown RBP13.3□□□□□ -0.28
NXF1-211ENST00000531709 PROSER2Q86WR7 435 aaPredicted RBP13.3□□□□□ -0.28
NXF1-211ENST00000531709 TM6SF1Q9BZW5 370 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 BCL2L12Q9HB09 334 aa13.3□□□□□ -0.28
NXF1-211ENST00000531709 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
NXF1-211ENST00000531709 IFIT1P09914 478 aaKnown RBP13.29□□□□□ -0.28
NXF1-211ENST00000531709 DDX21Q9NR30 783 aaKnown RBP eCLIP13.29□□□□□ -0.28
NXF1-211ENST00000531709 SIGLEC1Q9BZZ2 1709 aa13.29□□□□□ -0.28
NXF1-211ENST00000531709 TIMM10P62072 90 aa13.29□□□□□ -0.28
NXF1-211ENST00000531709 ZBTB3Q9H5J0 574 aa13.29□□□□□ -0.28
NXF1-211ENST00000531709 TMEM131LA2VDJ0 1609 aa13.29□□□□□ -0.28
NXF1-211ENST00000531709 MCMDC2Q4G0Z9 681 aa13.29□□□□□ -0.28
NXF1-211ENST00000531709 MAP4K1Q92918 833 aa13.29□□□□□ -0.28
NXF1-211ENST00000531709 RPAP1Q9BWH6 1393 aaPredicted RBP13.29□□□□□ -0.28
NXF1-211ENST00000531709 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
NXF1-211ENST00000531709 ORAI2Q96SN7 254 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 SASH1O94885 1247 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 HOXB7P09629 217 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 SKILP12757 684 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 U2AF2P26368 475 aaKnown RBP eCLIP13.28□□□□□ -0.285e-10■■■□□ 17.1
NXF1-211ENST00000531709 NECTIN1Q15223 517 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 CHRNA2Q15822 529 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 CEP126Q9P2H0 1117 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 LRRFIP1Q32MZ4 808 aaKnown RBP13.28□□□□□ -0.28
NXF1-211ENST00000531709 CPLX2Q6PUV4 134 aaKnown RBP13.28□□□□□ -0.28
NXF1-211ENST00000531709 PDILTQ8N807 584 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
NXF1-211ENST00000531709 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.28
NXF1-211ENST00000531709 HSP90AB3PQ58FF7 597 aa13.27□□□□□ -0.28
NXF1-211ENST00000531709 TRIM29Q14134 588 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 CCDC158Q5M9N0 1113 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 CEP135Q66GS9 1140 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 OTUD7BQ6GQQ9 843 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 ZSCAN16Q9H4T2 348 aaPredicted RBP13.27□□□□□ -0.29
NXF1-211ENST00000531709 MRVI1Q9Y6F6 885 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 STX1AQ16623 288 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 CHMP4CQ96CF2 233 aa13.27□□□□□ -0.29
NXF1-211ENST00000531709 SERPINC1P01008 464 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 ZNF790Q6PG37 636 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 TMEM87AQ8NBN3 555 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 C8orf76Q96K31 380 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
NXF1-211ENST00000531709 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 CCDC57Q2TAC2 916 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 KIAA1524Q8TCG1 905 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 ZNF75DP51815 510 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 TNNI3KQ59H18 835 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 CLSTN2Q9H4D0 955 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 FPGT-TNNI3KV9GXZ4 949 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 KIF20BQ96Q89 1820 aa13.26□□□□□ -0.29
NXF1-211ENST00000531709 A0A1B0GVL5 298 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 CHGBP05060 677 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 GCKRQ14397 625 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
NXF1-211ENST00000531709 TAF6LQ9Y6J9 622 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 PREX1Q8TCU6 1659 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
NXF1-211ENST00000531709 DHX16O60231 1041 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms