RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 HDAC5Q9UQL6 1122 aa12.55□□□□□ -0.4
PDCD6-209ENST00000512466 ZBTB22O15209 634 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 CUL4AQ13619 759 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
PDCD6-209ENST00000512466 HSP90AB3PQ58FF7 597 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 PDILTQ8N807 584 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 UVSSAQ2YD98 709 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
PDCD6-209ENST00000512466 PRDM4Q9UKN5 801 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 MTMR6Q9Y217 621 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 STK38Q15208 465 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
PDCD6-209ENST00000512466 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 TTLL5Q6EMB2 1281 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 OTUD7BQ6GQQ9 843 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 EVI5LQ96CN4 794 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 PRIMPOLQ96LW4 560 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
PDCD6-209ENST00000512466 NCOA5Q9HCD5 579 aaKnown RBP12.53□□□□□ -0.4
PDCD6-209ENST00000512466 TLR7Q9NYK1 1049 aaKnown RBP12.53□□□□□ -0.4
PDCD6-209ENST00000512466 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
PDCD6-209ENST00000512466 PNPLA6Q8IY17 1366 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 FTOQ9C0B1 505 aaKnown RBP eCLIP12.53□□□□□ -0.4
PDCD6-209ENST00000512466 SCAND2PQ9GZW5 306 aaPredicted RBP12.53□□□□□ -0.4
PDCD6-209ENST00000512466 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
PDCD6-209ENST00000512466 DBF4Q9UBU7 674 aaPredicted RBP12.53□□□□□ -0.4
PDCD6-209ENST00000512466 GOLIM4O00461 696 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 Q6ZUG5 572 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
PDCD6-209ENST00000512466 CHGBP05060 677 aa12.52□□□□□ -0.4
PDCD6-209ENST00000512466 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.4
PDCD6-209ENST00000512466 CBX8Q9HC52 389 aa12.52□□□□□ -0.4
PDCD6-209ENST00000512466 FLT4P35916 1363 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 MYOM1P52179 1685 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 PTPN14Q15678 1187 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.41
PDCD6-209ENST00000512466 LSG1Q9H089 658 aaKnown RBP12.52□□□□□ -0.41
PDCD6-209ENST00000512466 OSBPL3Q9H4L5 887 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 KNDC1Q76NI1 1749 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
PDCD6-209ENST00000512466 NR1I2O75469 434 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 HOXC9P31274 260 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 SLFNL1Q499Z3 407 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 CLEC17AQ6ZS10 378 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 FSIP1Q8NA03 581 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
PDCD6-209ENST00000512466 A0A0D9SFI3 127 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 SKIDA1Q1XH10 827 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 CD163L1Q9NR16 1453 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 CCDC171Q6TFL3 1326 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 PTPN21Q16825 1174 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
PDCD6-209ENST00000512466 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
PDCD6-209ENST00000512466 APOBRQ0VD83 1088 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 ANKRD1Q15327 319 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 IP6K1Q92551 441 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 AATKQ6ZMQ8 1374 aa12.51□□□□□ -0.41
PDCD6-209ENST00000512466 SLC27A2O14975 620 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 TPM3P06753 285 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 SKILP12757 684 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 TPM4P67936 248 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 NBPF6Q5VWK0 638 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 COPS6Q7L5N1 327 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 NBPF4Q96M43 638 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 ARHGEF10O15013 1369 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 ADAMTS2O95450 1211 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
PDCD6-209ENST00000512466 CHD2O14647 1828 aaKnown RBP12.49□□□□□ -0.41
PDCD6-209ENST00000512466 A0A087WZG4 1122 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 GRM8O00222 908 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 ANKRD24Q8TF21 1146 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 XAGE3Q8WTP9 111 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 HIP1O00291 1037 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 PES1O00541 588 aaKnown RBP12.49□□□□□ -0.41
PDCD6-209ENST00000512466 CERS3Q8IU89 383 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 PI4K2BQ8TCG2 481 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 CFAP45Q9UL16 551 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 SBNO1A3KN83 1393 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 XRN1Q8IZH2 1706 aaKnown RBP12.49□□□□□ -0.41
PDCD6-209ENST00000512466 DCCP43146 1447 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 CEP135Q66GS9 1140 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 NFXL1Q6ZNB6 911 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 RALYLQ86SE5 291 aaKnown RBP12.49□□□□□ -0.41
PDCD6-209ENST00000512466 TAF6LQ9Y6J9 622 aa12.49□□□□□ -0.41
PDCD6-209ENST00000512466 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms