RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 ADAMTS8Q9UP79 889 aa7.52□□□□□ -1.21
NF1-217ENST00000498569 TUBGCP6Q96RT7 1819 aa7.52□□□□□ -1.21
NF1-217ENST00000498569 ACEP12821 1306 aa7.52□□□□□ -1.21
NF1-217ENST00000498569 PIK3C2AO00443 1686 aa7.51□□□□□ -1.21
NF1-217ENST00000498569 POLR3AO14802 1390 aaPredicted RBP7.51□□□□□ -1.21
NF1-217ENST00000498569 C1QTNF8P60827 252 aa7.51□□□□□ -1.21
NF1-217ENST00000498569 KRT76Q01546 638 aa7.51□□□□□ -1.21
NF1-217ENST00000498569 DDB1Q16531 1140 aa7.51□□□□□ -1.21
NF1-217ENST00000498569 TRMT44Q8IYL2 757 aaKnown RBP7.51□□□□□ -1.21
NF1-217ENST00000498569 CCDC116Q8IYX3 515 aa7.51□□□□□ -1.21
NF1-217ENST00000498569 SVOPQ8N4V2 548 aa7.51□□□□□ -1.21
NF1-217ENST00000498569 FHDC1Q9C0D6 1143 aaPredicted RBP7.51□□□□□ -1.21
NF1-217ENST00000498569 STK32BQ9NY57 414 aa7.51□□□□□ -1.21
NF1-217ENST00000498569 LTN1O94822 1766 aa7.51□□□□□ -1.21
NF1-217ENST00000498569 PLSCR1O15162 318 aa7.5□□□□□ -1.21
NF1-217ENST00000498569 PTSQ03393 145 aa7.5□□□□□ -1.21
NF1-217ENST00000498569 NANOS1Q8WY41 292 aaKnown RBP7.5□□□□□ -1.21
NF1-217ENST00000498569 COL25A1Q9BXS0 654 aaPredicted RBP7.5□□□□□ -1.21
NF1-217ENST00000498569 PCDHB15Q9Y5E8 787 aa7.5□□□□□ -1.21
NF1-217ENST00000498569 USP19O94966 1318 aa7.5□□□□□ -1.21
NF1-217ENST00000498569 PAPPAQ13219 1627 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 SLIT3O75094 1523 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 GIGYF1O75420 1035 aaPredicted RBP7.49□□□□□ -1.21
NF1-217ENST00000498569 IGHA1P01876 353 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 TOM1L2Q6ZVM7 507 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.49□□□□□ -1.21
NF1-217ENST00000498569 SH3RF1Q7Z6J0 888 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 NLRP13Q86W25 1043 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 SYT17Q9BSW7 474 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 CDK19Q9BWU1 502 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 PDGFDQ9GZP0 370 aaPredicted RBP7.49□□□□□ -1.21
NF1-217ENST00000498569 PGPEP1Q9NXJ5 209 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 DNMT3AQ9Y6K1 912 aaPredicted RBP7.49□□□□□ -1.21
NF1-217ENST00000498569 PPIP5K1Q6PFW1 1433 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 SHANK3Q9BYB0 1731 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 TRPM1Q7Z4N2 1603 aa7.49□□□□□ -1.21
NF1-217ENST00000498569 GCP02774 474 aa7.48□□□□□ -1.21
NF1-217ENST00000498569 COL24A1Q17RW2 1714 aa7.48□□□□□ -1.21
NF1-217ENST00000498569 RIC3Q7Z5B4 369 aa7.48□□□□□ -1.21
NF1-217ENST00000498569 GPR161Q8N6U8 529 aaKnown RBP7.48□□□□□ -1.21
NF1-217ENST00000498569 DCAF11Q8TEB1 546 aa7.48□□□□□ -1.21
NF1-217ENST00000498569 TSC1Q92574 1164 aa7.48□□□□□ -1.21
NF1-217ENST00000498569 GPKOWQ92917 476 aaPredicted RBP eCLIP7.48□□□□□ -1.21
NF1-217ENST00000498569 MTFR1LQ9H019 292 aa7.48□□□□□ -1.21
NF1-217ENST00000498569 FOXK2Q01167 660 aa7.47□□□□□ -1.21
NF1-217ENST00000498569 SLC15A2Q16348 729 aa7.47□□□□□ -1.21
NF1-217ENST00000498569 ZNF385CQ66K41 422 aaPredicted RBP7.47□□□□□ -1.21
NF1-217ENST00000498569 KANK3Q6NY19 840 aa7.47□□□□□ -1.21
NF1-217ENST00000498569 SH3BP5LQ7L8J4 393 aa7.47□□□□□ -1.21
NF1-217ENST00000498569 CCDC155Q8N6L0 562 aa7.47□□□□□ -1.21
NF1-217ENST00000498569 HELBQ8NG08 1087 aaPredicted RBP7.47□□□□□ -1.21
NF1-217ENST00000498569 CDCA7Q9BWT1 371 aaPredicted RBP7.47□□□□□ -1.21
NF1-217ENST00000498569 ABCC6O95255 1503 aa7.47□□□□□ -1.21
NF1-217ENST00000498569 AATKQ6ZMQ8 1374 aa7.46□□□□□ -1.21
NF1-217ENST00000498569 BCL9O00512 1426 aa7.46□□□□□ -1.21
NF1-217ENST00000498569 CPSF1Q10570 1443 aaKnown RBP7.46□□□□□ -1.21
NF1-217ENST00000498569 MAGEB6P1A0A0J9YX57 407 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 PER1O15534 1290 aaPredicted RBP7.46□□□□□ -1.22
NF1-217ENST00000498569 ZMYND10O75800 440 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 SRPK2P78362 688 aaKnown RBP7.46□□□□□ -1.22
NF1-217ENST00000498569 GPR162Q16538 588 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 TXNRD1Q16881 649 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 CSPP1Q1MSJ5 1256 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 PTF1AQ7RTS3 328 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 ARXQ96QS3 562 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 WDR17Q8IZU2 1322 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 BRD4O60885 1362 aaPredicted RBP7.46□□□□□ -1.22
NF1-217ENST00000498569 MAP3K5Q99683 1374 aa7.46□□□□□ -1.22
NF1-217ENST00000498569 TNS2Q63HR2 1409 aa7.45□□□□□ -1.22
NF1-217ENST00000498569 FAM208AQ9UK61 1670 aaKnown RBP7.45□□□□□ -1.22
NF1-217ENST00000498569 LY75O60449 1722 aa7.45□□□□□ -1.22
NF1-217ENST00000498569 MON2Q7Z3U7 1717 aa7.45□□□□□ -1.22
NF1-217ENST00000498569 DOT1LQ8TEK3 1739 aa7.45□□□□□ -1.22
NF1-217ENST00000498569 SPINT1O43278 529 aa7.45□□□□□ -1.22
NF1-217ENST00000498569 SLURP2P0DP57 97 aa7.45□□□□□ -1.22
NF1-217ENST00000498569 CSB-PGBD3P0DP91 1061 aa7.45□□□□□ -1.22
NF1-217ENST00000498569 MARSP56192 900 aaKnown RBP7.45□□□□□ -1.22
NF1-217ENST00000498569 PARP9Q8IXQ6 854 aa7.45□□□□□ -1.22
NF1-217ENST00000498569 MARCH10Q8NA82 808 aaPredicted RBP7.45□□□□□ -1.22
NF1-217ENST00000498569 USP6P35125 1406 aa7.44□□□□□ -1.22
NF1-217ENST00000498569 FIGNL2A6NMB9 653 aa7.44□□□□□ -1.22
NF1-217ENST00000498569 DHX9Q08211 1270 aaKnown RBP7.44□□□□□ -1.22
NF1-217ENST00000498569 TUSC1Q2TAM9 212 aa7.44□□□□□ -1.22
NF1-217ENST00000498569 PPP1R26Q5T8A7 1209 aaPredicted RBP7.44□□□□□ -1.22
NF1-217ENST00000498569 GPAT2Q6NUI2 795 aa7.44□□□□□ -1.22
NF1-217ENST00000498569 Q6ZVU0 165 aa7.44□□□□□ -1.22
NF1-217ENST00000498569 SV2AQ7L0J3 742 aa7.44□□□□□ -1.22
NF1-217ENST00000498569 SCARF2Q96GP6 870 aaPredicted RBP7.44□□□□□ -1.22
NF1-217ENST00000498569 CDV3Q9UKY7 258 aaKnown RBP7.44□□□□□ -1.22
NF1-217ENST00000498569 CDC14CA4D256 554 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 SLC35F4A4IF30 521 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 EXOC5O00471 708 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 ITGA6P23229 1130 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 POLD1P28340 1107 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 IRS1P35568 1242 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 RNFT1Q5M7Z0 435 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 CARD14Q9BXL6 1004 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 USP54Q70EL1 1684 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 CCDC7Q96M83 1385 aa7.43□□□□□ -1.22
NF1-217ENST00000498569 RAB3GAP2Q9H2M9 1393 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms