RNA–Protein interactions for RNA: ENST00000497409.1

ZNF561-221, Transcript of zinc finger protein 561, humanhuman

TSL 2

Gene ZNF561, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-221ENST00000497409 ZNF438Q7Z4V0 828 aa9.1□□□□□ -0.95
ZNF561-221ENST00000497409 NT5DC4Q86YG4 428 aa9.1□□□□□ -0.95
ZNF561-221ENST00000497409 SNX29Q8TEQ0 813 aa9.1□□□□□ -0.95
ZNF561-221ENST00000497409 RNF34Q969K3 372 aa9.1□□□□□ -0.95
ZNF561-221ENST00000497409 SPG7Q9UQ90 795 aa9.1□□□□□ -0.95
ZNF561-221ENST00000497409 A0A1W2PNR3 127 aa9.09□□□□□ -0.95
ZNF561-221ENST00000497409 TTLL8A6PVC2 850 aa9.09□□□□□ -0.95
ZNF561-221ENST00000497409 ZNF76P36508 570 aa9.09□□□□□ -0.95
ZNF561-221ENST00000497409 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.09□□□□□ -0.95
ZNF561-221ENST00000497409 USPL1Q5W0Q7 1092 aa9.09□□□□□ -0.95
ZNF561-221ENST00000497409 CRELD1Q96HD1 420 aa9.09□□□□□ -0.95
ZNF561-221ENST00000497409 DRC1Q96MC2 740 aa9.09□□□□□ -0.95
ZNF561-221ENST00000497409 IGF1RP08069 1367 aa9.09□□□□□ -0.95
ZNF561-221ENST00000497409 CTSHP09668 335 aa9.08□□□□□ -0.96
ZNF561-221ENST00000497409 GRNP28799 593 aaKnown RBP9.08□□□□□ -0.96
ZNF561-221ENST00000497409 TYRO3Q06418 890 aa9.08□□□□□ -0.96
ZNF561-221ENST00000497409 CCDC74AQ96AQ1 378 aa9.08□□□□□ -0.96
ZNF561-221ENST00000497409 ELP3Q9H9T3 547 aa9.08□□□□□ -0.96
ZNF561-221ENST00000497409 ZFYVE28Q9HCC9 887 aa9.08□□□□□ -0.96
ZNF561-221ENST00000497409 TARBP1Q13395 1621 aaKnown RBP9.08□□□□□ -0.96
ZNF561-221ENST00000497409 PRXQ9BXM0 1461 aa9.08□□□□□ -0.96
ZNF561-221ENST00000497409 PHACTR2O75167 634 aa9.07□□□□□ -0.96
ZNF561-221ENST00000497409 EPB42P16452 691 aa9.07□□□□□ -0.96
ZNF561-221ENST00000497409 EIF4BP23588 611 aaKnown RBP9.07□□□□□ -0.96
ZNF561-221ENST00000497409 SCARF1Q14162 830 aa9.07□□□□□ -0.96
ZNF561-221ENST00000497409 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
ZNF561-221ENST00000497409 TDRD9Q8NDG6 1382 aaKnown RBP9.07□□□□□ -0.96
ZNF561-221ENST00000497409 GOLGA3Q08378 1498 aa9.07□□□□□ -0.96
ZNF561-221ENST00000497409 SOS2Q07890 1332 aaPredicted RBP9.06□□□□□ -0.96
ZNF561-221ENST00000497409 FIGNL2A6NMB9 653 aa9.06□□□□□ -0.96
ZNF561-221ENST00000497409 IRS1P35568 1242 aa9.06□□□□□ -0.96
ZNF561-221ENST00000497409 PI16Q6UXB8 463 aa9.06□□□□□ -0.96
ZNF561-221ENST00000497409 EPS8L3Q8TE67 593 aaKnown RBP9.06□□□□□ -0.96
ZNF561-221ENST00000497409 CEP63Q96MT8 703 aa9.06□□□□□ -0.96
ZNF561-221ENST00000497409 CRISPLD1Q9H336 500 aa9.06□□□□□ -0.96
ZNF561-221ENST00000497409 TMEM63CQ9P1W3 806 aa9.06□□□□□ -0.96
ZNF561-221ENST00000497409 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 KIF21BO75037 1637 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 GIPC1O14908 333 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 BMP1P13497 986 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 OSBPL7Q9BZF2 842 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 TGIF2Q9GZN2 237 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 C12orf49Q9H741 205 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 GPAMQ9HCL2 828 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 NLRP2Q9NX02 1062 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 ABCA5Q8WWZ7 1642 aa9.05□□□□□ -0.96
ZNF561-221ENST00000497409 GAPVD1Q14C86 1478 aa9.04□□□□□ -0.96
ZNF561-221ENST00000497409 XYLBO75191 536 aa9.04□□□□□ -0.96
ZNF561-221ENST00000497409 AVPP01185 164 aa9.04□□□□□ -0.96
ZNF561-221ENST00000497409 SF3A1Q15459 793 aaKnown RBP9.04□□□□□ -0.96
ZNF561-221ENST00000497409 RUBCNLQ9H714 662 aa9.04□□□□□ -0.96
ZNF561-221ENST00000497409 DYRK1BQ9Y463 629 aa9.04□□□□□ -0.96
ZNF561-221ENST00000497409 RAPGEF2Q9Y4G8 1499 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 CARMIL1Q5VZK9 1371 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 TNIKQ9UKE5 1360 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 EGFRP00533 1210 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 TRIM46Q7Z4K8 759 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 NLRP8Q86W28 1048 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 CHRDQ9H2X0 955 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 CCSER2Q9H7U1 834 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 C11orf16Q9NQ32 467 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 ERICH3Q5RHP9 1530 aa9.03□□□□□ -0.96
ZNF561-221ENST00000497409 ZNF608Q9ULD9 1512 aaPredicted RBP9.02□□□□□ -0.97
ZNF561-221ENST00000497409 F11P03951 625 aa9.02□□□□□ -0.97
ZNF561-221ENST00000497409 POLR3DP05423 398 aaPredicted RBP9.02□□□□□ -0.97
ZNF561-221ENST00000497409 PGBD3Q8N328 593 aa9.02□□□□□ -0.97
ZNF561-221ENST00000497409 NPHS2Q9NP85 383 aa9.02□□□□□ -0.97
ZNF561-221ENST00000497409 BRD7Q9NPI1 651 aa9.02□□□□□ -0.97
ZNF561-221ENST00000497409 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
ZNF561-221ENST00000497409 AQRO60306 1485 aaKnown RBP eCLIP9.02□□□□□ -0.97
ZNF561-221ENST00000497409 EREGO14944 169 aa9.01□□□□□ -0.97
ZNF561-221ENST00000497409 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
ZNF561-221ENST00000497409 GALNT12Q8IXK2 581 aa9.01□□□□□ -0.97
ZNF561-221ENST00000497409 C1orf127Q8N9H9 656 aa9.01□□□□□ -0.97
ZNF561-221ENST00000497409 TINF2Q9BSI4 451 aa9.01□□□□□ -0.97
ZNF561-221ENST00000497409 ABI2Q9NYB9 513 aaPredicted RBP9.01□□□□□ -0.97
ZNF561-221ENST00000497409 GRIN2BQ13224 1484 aa9.01□□□□□ -0.97
ZNF561-221ENST00000497409 ZFP42Q96MM3 310 aa9□□□□□ -0.97
ZNF561-221ENST00000497409 GAS2L1Q99501 681 aaPredicted RBP9□□□□□ -0.97
ZNF561-221ENST00000497409 ZCCHC2Q9C0B9 1178 aaKnown RBP9□□□□□ -0.97
ZNF561-221ENST00000497409 FAM8A1Q9UBU6 413 aa9□□□□□ -0.97
ZNF561-221ENST00000497409 PPP1R1BQ9UD71 204 aaPredicted RBP9□□□□□ -0.97
ZNF561-221ENST00000497409 DNMT3LQ9UJW3 386 aa9□□□□□ -0.97
ZNF561-221ENST00000497409 EPB41L3Q9Y2J2 1087 aaPredicted RBP9□□□□□ -0.97
ZNF561-221ENST00000497409 USP31Q70CQ4 1352 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 GADD45BO75293 160 aaPredicted RBP8.99□□□□□ -0.97
ZNF561-221ENST00000497409 USP17L7P0C7H9 530 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
ZNF561-221ENST00000497409 KCNQ4P56696 695 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 PTPN12Q05209 780 aaKnown RBP8.99□□□□□ -0.97
ZNF561-221ENST00000497409 CTC1Q2NKJ3 1217 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 EFHC2Q5JST6 749 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 UBXN4Q92575 508 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 PMEPA1Q969W9 287 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 BCO2Q9BYV7 579 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 SRCIN1Q9C0H9 1055 aa8.99□□□□□ -0.97
ZNF561-221ENST00000497409 ACBD3Q9H3P7 528 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms