RNA–Protein interactions for RNA: ENST00000497409.1

ZNF561-221, Transcript of zinc finger protein 561, humanhuman

TSL 2

Gene ZNF561, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-221ENST00000497409 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
ZNF561-221ENST00000497409 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
ZNF561-221ENST00000497409 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
ZNF561-221ENST00000497409 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
ZNF561-221ENST00000497409 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
ZNF561-221ENST00000497409 FOXD1Q16676 465 aa18.05■□□□□ 0.48
ZNF561-221ENST00000497409 ADRA2BP18089 450 aa17.98■□□□□ 0.47
ZNF561-221ENST00000497409 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
ZNF561-221ENST00000497409 KCNA4P22459 653 aa17.41■□□□□ 0.38
ZNF561-221ENST00000497409 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
ZNF561-221ENST00000497409 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
ZNF561-221ENST00000497409 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
ZNF561-221ENST00000497409 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
ZNF561-221ENST00000497409 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
ZNF561-221ENST00000497409 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
ZNF561-221ENST00000497409 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
ZNF561-221ENST00000497409 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
ZNF561-221ENST00000497409 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
ZNF561-221ENST00000497409 MSH5O43196 834 aa16.35■□□□□ 0.21
ZNF561-221ENST00000497409 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
ZNF561-221ENST00000497409 ZBTB22O15209 634 aa16.04■□□□□ 0.16
ZNF561-221ENST00000497409 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
ZNF561-221ENST00000497409 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
ZNF561-221ENST00000497409 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
ZNF561-221ENST00000497409 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
ZNF561-221ENST00000497409 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
ZNF561-221ENST00000497409 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
ZNF561-221ENST00000497409 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
ZNF561-221ENST00000497409 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
ZNF561-221ENST00000497409 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
ZNF561-221ENST00000497409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
ZNF561-221ENST00000497409 FKBP8Q14318 412 aa14.88□□□□□ -0.03
ZNF561-221ENST00000497409 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
ZNF561-221ENST00000497409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
ZNF561-221ENST00000497409 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
ZNF561-221ENST00000497409 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.05
ZNF561-221ENST00000497409 AMER1Q5JTC6 1135 aaPredicted RBP14.76□□□□□ -0.05
ZNF561-221ENST00000497409 RTN4Q9NQC3 1192 aaKnown RBP14.76□□□□□ -0.05
ZNF561-221ENST00000497409 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
ZNF561-221ENST00000497409 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
ZNF561-221ENST00000497409 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
ZNF561-221ENST00000497409 APLP2Q06481 763 aa14.46□□□□□ -0.09
ZNF561-221ENST00000497409 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
ZNF561-221ENST00000497409 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
ZNF561-221ENST00000497409 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
ZNF561-221ENST00000497409 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
ZNF561-221ENST00000497409 FBXO3Q9UK99 471 aa14.14□□□□□ -0.15
ZNF561-221ENST00000497409 FBLN2P98095 1184 aa14.12□□□□□ -0.15
ZNF561-221ENST00000497409 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
ZNF561-221ENST00000497409 PROM2Q8N271 834 aa14.08□□□□□ -0.16
ZNF561-221ENST00000497409 POLA2Q14181 598 aa14.07□□□□□ -0.16
ZNF561-221ENST00000497409 CAPN15O75808 1086 aa14.04□□□□□ -0.16
ZNF561-221ENST00000497409 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
ZNF561-221ENST00000497409 C1QBPQ07021 282 aaKnown RBP13.95□□□□□ -0.18
ZNF561-221ENST00000497409 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
ZNF561-221ENST00000497409 ABCB7O75027 752 aa13.84□□□□□ -0.19
ZNF561-221ENST00000497409 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
ZNF561-221ENST00000497409 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
ZNF561-221ENST00000497409 DSG3P32926 999 aa13.64□□□□□ -0.23
ZNF561-221ENST00000497409 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
ZNF561-221ENST00000497409 PKD2Q13563 968 aa13.62□□□□□ -0.23
ZNF561-221ENST00000497409 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
ZNF561-221ENST00000497409 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
ZNF561-221ENST00000497409 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
ZNF561-221ENST00000497409 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
ZNF561-221ENST00000497409 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
ZNF561-221ENST00000497409 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
ZNF561-221ENST00000497409 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
ZNF561-221ENST00000497409 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
ZNF561-221ENST00000497409 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
ZNF561-221ENST00000497409 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
ZNF561-221ENST00000497409 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
ZNF561-221ENST00000497409 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
ZNF561-221ENST00000497409 HAP1P54257 671 aaPredicted RBP13.42□□□□□ -0.26
ZNF561-221ENST00000497409 ECM2O94769 699 aaPredicted RBP13.4□□□□□ -0.26
ZNF561-221ENST00000497409 MIER1Q8N108 512 aa13.38□□□□□ -0.27
ZNF561-221ENST00000497409 BBXQ8WY36 941 aaPredicted RBP13.29□□□□□ -0.28
ZNF561-221ENST00000497409 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
ZNF561-221ENST00000497409 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.27□□□□□ -0.29
ZNF561-221ENST00000497409 RGL2O15211 777 aa13.26□□□□□ -0.29
ZNF561-221ENST00000497409 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
ZNF561-221ENST00000497409 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
ZNF561-221ENST00000497409 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
ZNF561-221ENST00000497409 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
ZNF561-221ENST00000497409 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
ZNF561-221ENST00000497409 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
ZNF561-221ENST00000497409 BCANQ96GW7 911 aa13.14□□□□□ -0.31
ZNF561-221ENST00000497409 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
ZNF561-221ENST00000497409 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
ZNF561-221ENST00000497409 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
ZNF561-221ENST00000497409 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
ZNF561-221ENST00000497409 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
ZNF561-221ENST00000497409 GSE1Q14687 1217 aa13.01□□□□□ -0.33
ZNF561-221ENST00000497409 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
ZNF561-221ENST00000497409 NUBP1P53384 320 aa12.98□□□□□ -0.33
ZNF561-221ENST00000497409 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
ZNF561-221ENST00000497409 HS6ST3Q8IZP7 471 aa12.97□□□□□ -0.33
ZNF561-221ENST00000497409 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
ZNF561-221ENST00000497409 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
ZNF561-221ENST00000497409 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms