RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Slf2Q6P9P0 1278 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 IqcgQ80W32 419 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Iffo1Q8BXL9 562 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Bicdl1A0JNT9 577 aa12.15□□□□□ -0.47
Nup50-201ENSMUST00000165443 Cacna2d4Q5RJF7 1116 aa12.15□□□□□ -0.47
Nup50-201ENSMUST00000165443 Arhgef18Q6P9R4 1021 aa12.15□□□□□ -0.47
Nup50-201ENSMUST00000165443 Klc3Q91W40 508 aa12.15□□□□□ -0.47
Nup50-201ENSMUST00000165443 StambpQ9CQ26 424 aa12.15□□□□□ -0.47
Nup50-201ENSMUST00000165443 Dync1i1O88485 628 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 ParvgQ9ERD8 331 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Nfxl1E9Q8I7 918 aaKnown RBP12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Prim1P20664 417 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ccdc42Q5SV66 316 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Kiaa1524Q8BWY9 907 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Rapgef3Q8VCC8 918 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Zbtb43Q9DAI4 467 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Tbc1d8Q9Z1A9 1134 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Lamc1P02468 1607 aaKnown RBP12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Cul7Q8VE73 1689 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Frmpd2A0A140LI67 1392 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Sbno1Q689Z5 1390 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Sptlc2P97363 560 aaKnown RBP12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Hip1rQ9JKY5 1068 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Pde3aQ9Z0X4 1141 aa12.14□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ces1aE9PYP1 563 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Syt1P46096 421 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Tax1bp1Q3UKC1 814 aaKnown RBP12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Nek11Q8C0Q4 628 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ppfibp1Q8C8U0 969 aaKnown RBP12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Bloc1s4Q8VED2 215 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Zbtb21E9Q444 1094 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Zfp42P22227 288 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ssrp1Q08943 708 aaKnown RBP12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Tmx3Q8BXZ1 456 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Cep170Q6A065 1588 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 VeztQ3ZK22 780 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Tbc1d5Q80XQ2 815 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Skor1Q8BX46 964 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Serpina10Q8R121 448 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Vps16Q920Q4 839 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Kdm4cQ8VCD7 1054 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 Rufy3Q9D394 469 aa12.13□□□□□ -0.47
Nup50-201ENSMUST00000165443 E9QMW4 1145 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Acbd3Q8BMP6 525 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ttc5Q99LG4 440 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 BrapQ99MP8 591 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 GnpatP98192 678 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 RragbQ6NTA4 374 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 SfpqQ8VIJ6 699 aaKnown RBP12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Abca8bQ8K440 1620 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Hdhd2Q3UGR5 259 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Gas8Q60779 478 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Sh3d21Q7TSG5 549 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ccdc94Q9D6J3 314 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Stx8O88983 236 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Hmgb1P63158 215 aaKnown RBP12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ifit1bl2Q3U687 466 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ehbp1Q69ZW3 1231 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Farp2Q91VS8 1065 aa12.12□□□□□ -0.47
Nup50-201ENSMUST00000165443 Tagap1P0CAX8 505 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Atp2b3Q0VF55 1220 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Fgfr1opQ66JX5 399 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ift74Q8BKE9 600 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 BbxQ8VBW5 907 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Cnot6lQ8VEG6 555 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Klhdc4Q921I2 584 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 DesP31001 469 aaKnown RBP12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Mcm6P97311 821 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Cyp7a1Q64505 503 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 RalylQ8BTF8 293 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Triml1Q8BVP1 470 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Grpel1Q99LP6 217 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Lman1Q9D0F3 517 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Lmbr1lQ9D1E5 489 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Ankrd50F7BE84 1390 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Gm45015A0A140LII9 184 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 TrdnE9Q9K5 693 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 GptQ8QZR5 496 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Vps36Q91XD6 386 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Luc7l2Q7TNC4 392 aaKnown RBP12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Tti2Q8BGV4 512 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 DlatQ8BMF4 642 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 GckrQ91X44 587 aa12.11□□□□□ -0.47
Nup50-201ENSMUST00000165443 Pdzrn3Q69ZS0 1063 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Gle1Q8R322 699 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Prpf40aQ9R1C7 953 aaKnown RBP12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Speer4aF8VPX6 267 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Slc1a4O35874 532 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Calm1P0DP26 149 aaKnown RBP12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Calm2P0DP27 149 aaKnown RBP12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Calm3P0DP28 149 aaKnown RBP12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Gbp1Q01514 589 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Tex2Q6ZPJ0 1128 aaKnown RBP12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Tceanc2Q8R2M0 207 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Haus2Q9CQS9 234 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Nsfl1cQ9CZ44 370 aaKnown RBP12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 AmfrQ9R049 643 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Neurl4Q5NCX5 1563 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Mast1Q9R1L5 1570 aa12.1□□□□□ -0.47
Nup50-201ENSMUST00000165443 Gm28919A0A087WP35 240 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 109.5 ms