RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 Kdm3aQ6PCM1 1323 aa32.67■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Ddx46Q569Z5 1032 aaKnown RBP32.67■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Krt25Q8VCW2 446 aa32.67■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Ugt1a5B2RT14 529 aa32.66■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Pof1bQ8K4L4 587 aa32.66■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Hmg20bQ9Z104 317 aa32.66■■■□□ 2.82
Ldb1-207ENSMUST00000156585 RubcnlQ3TD16 648 aa32.65■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Rdm1Q9CQK3 281 aa32.65■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Rapgef4Q9EQZ6 1011 aa32.65■■■□□ 2.82
Ldb1-207ENSMUST00000156585 ZyxQ62523 564 aa32.65■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Polr3dQ91WD1 398 aa32.65■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Cdca7lQ922M5 438 aa32.65■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Casz1Q9CWL2 1761 aa32.64■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Syt1P46096 421 aa32.64■■■□□ 2.82
Ldb1-207ENSMUST00000156585 BcanQ61361 883 aa32.64■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Psrc1Q9D0P7 329 aa32.64■■■□□ 2.82
Ldb1-207ENSMUST00000156585 Isy1Q69ZQ2 285 aaKnown RBP32.63■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Cops6O88545 324 aa32.63■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Ncoa5Q91W39 579 aaKnown RBP32.63■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Erc1Q99MI1 1120 aa32.63■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Golim4Q8BXA1 655 aa32.62■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Ppil4Q9CXG3 492 aaKnown RBP32.62■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Atp8a2P98200 1148 aa32.61■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Greb1lB9EJV3 1913 aa32.61■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Prr29B1ARI9 187 aa32.61■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Ftl2P49945 183 aa32.61■■■□□ 2.81
Ldb1-207ENSMUST00000156585 ImpactO55091 318 aa32.6■■■□□ 2.81
Ldb1-207ENSMUST00000156585 PogkQ80TC5 607 aa32.6■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Prr5lA2AVJ5 370 aa32.6■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Zbtb38Q3LR78 1197 aa32.6■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Npc1l1Q6T3U4 1333 aa32.59■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Slc4a1P04919 929 aa32.58■■■□□ 2.81
Ldb1-207ENSMUST00000156585 Foxo4Q9WVH3 505 aa32.58■■■□□ 2.81
Ldb1-207ENSMUST00000156585 NpeppsQ11011 920 aa32.57■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Mb21d2Q8C525 428 aa32.57■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Smc3Q9CW03 1217 aaKnown RBP32.57■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Ggt6Q6PDE7 497 aa32.56■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Sp8Q8BMJ8 486 aa32.56■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Klc3Q91W40 508 aa32.56■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Rtn4Q99P72 1162 aaKnown RBP32.56■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Cacna1sQ02789 1880 aa32.56■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Pkp1P97350 728 aaKnown RBP32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Sf3b2Q3UJB0 878 aaKnown RBP32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Rps6kb1Q8BSK8 525 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Zkscan8Q8BSL0 588 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Tmx3Q8BXZ1 456 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Slc5a4bQ91ZP4 660 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Myh1Q5SX40 1942 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Trim34bJ3QNR8 485 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 TsksO54887 585 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Gpr182P43142 395 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Esco1Q69Z69 843 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Kank4Q6P9J5 1016 aa32.55■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Ankrd31A0A140LI88 1765 aa32.54■■■□□ 2.8
Ldb1-207ENSMUST00000156585 F2rP30558 430 aa32.54■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Cpa2Q504N0 417 aa32.53■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Fbxl16A2RT62 479 aa32.53■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Ppp4r3bQ922R5 820 aa32.53■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Cyp7a1Q64505 503 aa32.52■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Lrrfip2Q91WK0 415 aa32.52■■■□□ 2.8
Ldb1-207ENSMUST00000156585 TnksQ6PFX9 1320 aa32.52■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Znf692Q3U381 531 aa32.51■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Miga2Q8BK03 593 aa32.51■■■□□ 2.8
Ldb1-207ENSMUST00000156585 Usp44Q8C2S0 711 aa32.51■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Mrpl50Q8VDT9 159 aaKnown RBP32.51■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Cyp3a57D3YYZ0 503 aa32.5■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Slf2Q6P9P0 1278 aa32.5■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Tubb6Q922F4 447 aa32.5■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Trim34aQ99PP6 485 aa32.5■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Pus3Q9JI38 481 aa32.5■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Atp2b3Q0VF55 1220 aa32.49■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Itga6Q61739 1091 aa32.49■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Stx6Q9JKK1 255 aa32.49■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Cyp2d10P24456 504 aa32.48■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Ltv1Q6NSQ7 470 aaKnown RBP32.48■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Glipr1l2Q9CQ35 332 aa32.48■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Zfp804bA0A0G2JGH6 1343 aa32.48■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Anxa1P10107 346 aaKnown RBP32.48■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Kcnq5Q9JK45 933 aa32.48■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Rps6ka4Q9Z2B9 773 aa32.48■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Plcd4Q8K3R3 807 aa32.47■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Fam160b2Q80YR2 744 aa32.46■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Hspa1lP16627 641 aa32.46■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Tceanc2Q8R2M0 207 aa32.46■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Irx3P81067 507 aa32.45■■■□□ 2.79
Ldb1-207ENSMUST00000156585 Irgm2A0A140LIF8 407 aa32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Rab3gap1Q80UJ7 981 aa32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Fbxo3Q9DC63 480 aa32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Slc38a10Q5I012 1090 aa32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Slfnl1Q8BHW9 410 aa32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Ptcd1Q8C2E4 695 aaKnown RBP32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Rbm17Q8JZX4 405 aaKnown RBP32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Ccne2Q9Z238 404 aa32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Lama4P97927 1816 aa32.44■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Eef2kO08796 724 aa32.43■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Susd4Q8BH32 490 aa32.43■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Gripap1Q8VD04 806 aa32.43■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Riok1Q922Q2 567 aa32.43■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Fam84aQ9D650 292 aa32.43■■■□□ 2.78
Ldb1-207ENSMUST00000156585 Bin2D3Z6Q9 489 aa32.42■■■□□ 2.78
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms