RNA–Protein interactions for RNA: ENSMUST00000155701.8

Pcdh15-229, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-229ENSMUST00000155701 Ifit1bl2Q3U687 466 aa12.41□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 Lmbrd2Q8C561 694 aa12.41□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 Elmsan1E9Q2I4 1089 aaKnown RBP12.4□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 Rbm27Q5SFM8 1060 aaKnown RBP12.4□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 Susd4Q8BH32 490 aa12.4□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 Q9D9S1 216 aa12.4□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 IncenpQ9WU62 880 aa12.4□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 Ccne2Q9Z238 404 aa12.4□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 AtrnQ9WU60 1428 aa12.4□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 Tbc1d4Q8BYJ6 1307 aa12.4□□□□□ -0.42
Pcdh15-229ENSMUST00000155701 Cyp2c23E9Q5K4 494 aa12.4□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Mcm4P49717 862 aa12.4□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Zbtb38Q3LR78 1197 aa12.4□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Asap2Q7SIG6 958 aa12.4□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Ubxn10Q8BG34 277 aa12.4□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Fam102bQ8BQS4 339 aa12.4□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Krt25Q8VCW2 446 aa12.4□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 StrbpQ91WM1 672 aaKnown RBP12.4□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Atp6v1dP57746 247 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Pkp1P97350 728 aaKnown RBP12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Rassf8Q8CJ96 419 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Rbm17Q8JZX4 405 aaKnown RBP12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 MypopQ8R4U1 393 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Trim34aQ99PP6 485 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Bin2D3Z6Q9 489 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Trim34bJ3QNR8 485 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Ercc3P49135 783 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Itga6Q61739 1091 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 St18Q80TY4 1045 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Sgsm2Q80U12 1005 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Ciao1Q99KN2 339 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 NgdnQ9DB96 315 aaKnown RBP12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Foxo4Q9WVH3 505 aa12.39□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Kat6bQ8BRB7 1872 aa12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 GakQ99KY4 1305 aa12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Sema6bO54951 886 aa12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Plcb3P51432 1234 aaKnown RBP12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Smarcc1P97496 1104 aa12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Sh3bp5Q9Z131 463 aa12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Cyp2d10P24456 504 aa12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Mrpl50Q8VDT9 159 aaKnown RBP12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Ccdc7Q9D541 371 aa12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 PhaxQ9JJT9 385 aaKnown RBP12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 TnksQ6PFX9 1320 aa12.38□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Vps33bP59016 617 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Tmem266Q8BZB3 538 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Lrrfip2Q91WK0 415 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Mapk8ip1Q9WVI9 707 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Sipa1l3G3X9J0 1776 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Atp2b3Q0VF55 1220 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 ZyxQ62523 564 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Kank4Q6P9J5 1016 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Nyap1Q6PFX7 833 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Dmrt2Q8BG36 561 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Nek11Q8C0Q4 628 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Mb21d2Q8C525 428 aa12.37□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 TsksO54887 585 aa12.36□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Syt1P46096 421 aa12.36□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Popdc2Q9ES82 367 aa12.36□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Rnf20Q5DTM8 973 aa12.36□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Emilin2Q8K482 1074 aa12.36□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Atf7Q8R0S1 413 aa12.36□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Myh1Q5SX40 1942 aa12.36□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Kcnb2A6H8H5 907 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Prl7a2O54831 253 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Fkbp1aP26883 108 aaKnown RBP12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Erc1Q99MI1 1120 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Rps6ka4Q9Z2B9 773 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Cacna1sQ02789 1880 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Gm45015A0A140LII9 184 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Gm18336A0A140LIU8 765 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Gm13023A2A8N2 498 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 InhbeO08717 350 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Atp8a2P98200 1148 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Trim56Q80VI1 734 aaKnown RBP12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Sp8Q8BMJ8 486 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Tsr2Q8C8T8 191 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Rdm1Q9CQK3 281 aa12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Smc3Q9CW03 1217 aaKnown RBP12.35□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Babam1Q3UI43 333 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Usp48Q3V0C5 1052 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 EappQ5BU09 281 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Zc3h12cQ5DTV4 884 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Ddx19aQ61655 478 aaKnown RBP12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Kcnq3Q8K3F6 873 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Bmp2kQ91Z96 1138 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Lrp6O88572 1613 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Nphp3Q7TNH6 1325 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Sptlc3Q8BG54 563 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Ptcd1Q8C2E4 695 aaKnown RBP12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Cchcr1Q8K2I2 770 aa12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Psma5Q9Z2U1 241 aaKnown RBP12.34□□□□□ -0.43
Pcdh15-229ENSMUST00000155701 Cyp3a57D3YYZ0 503 aa12.33□□□□□ -0.44
Pcdh15-229ENSMUST00000155701 Ppfibp2O35711 882 aa12.33□□□□□ -0.44
Pcdh15-229ENSMUST00000155701 Gadd45bP22339 160 aa12.33□□□□□ -0.44
Pcdh15-229ENSMUST00000155701 Irgm2A0A140LIF8 407 aa12.33□□□□□ -0.44
Pcdh15-229ENSMUST00000155701 CltaO08585 235 aa12.33□□□□□ -0.44
Pcdh15-229ENSMUST00000155701 Stox1B2RQL2 990 aa12.32□□□□□ -0.44
Pcdh15-229ENSMUST00000155701 Pde8bE9Q4S1 865 aa12.32□□□□□ -0.44
Pcdh15-229ENSMUST00000155701 Hand2Q61039 217 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms