RNA–Protein interactions for RNA: ENSMUST00000155701.8

Pcdh15-229, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-229ENSMUST00000155701 NischQ80TM9 1593 aa20.77■□□□□ 0.92
Pcdh15-229ENSMUST00000155701 Gm35339A0A140LHH9 1649 aa20.4■□□□□ 0.86
Pcdh15-229ENSMUST00000155701 Abcc9P70170 1546 aa20.08■□□□□ 0.81
Pcdh15-229ENSMUST00000155701 Abcc8B2RUS7 1588 aa19.77■□□□□ 0.76
Pcdh15-229ENSMUST00000155701 Rhox8Q6VSS7 320 aa19.18■□□□□ 0.66
Pcdh15-229ENSMUST00000155701 ScribQ80U72 1612 aa18.59■□□□□ 0.57
Pcdh15-229ENSMUST00000155701 Dcaf1Q80TR8 1506 aa18.27■□□□□ 0.51
Pcdh15-229ENSMUST00000155701 Rtl1Q7M732 1744 aa18.24■□□□□ 0.51
Pcdh15-229ENSMUST00000155701 Kdm5dQ62240 1548 aa18.21■□□□□ 0.51
Pcdh15-229ENSMUST00000155701 Rb1cc1Q9ESK9 1588 aa18.18■□□□□ 0.5
Pcdh15-229ENSMUST00000155701 NacadQ5SWP3 1504 aa18.07■□□□□ 0.48
Pcdh15-229ENSMUST00000155701 Ccdc180J3QNE4 1664 aa17.91■□□□□ 0.46
Pcdh15-229ENSMUST00000155701 Baz1aO88379 1555 aa17.91■□□□□ 0.46
Pcdh15-229ENSMUST00000155701 Ccdc136Q3TVA9 1136 aa17.85■□□□□ 0.45
Pcdh15-229ENSMUST00000155701 Zcchc6Q5BLK4 1491 aaKnown RBP17.77■□□□□ 0.44
Pcdh15-229ENSMUST00000155701 Sycp2Q9CUU3 1500 aa17.69■□□□□ 0.42
Pcdh15-229ENSMUST00000155701 Crybg2B7ZCC2 1516 aa17.56■□□□□ 0.4
Pcdh15-229ENSMUST00000155701 Smarca2Q6DIC0 1577 aa17.46■□□□□ 0.39
Pcdh15-229ENSMUST00000155701 BicraF8VPZ9 1578 aa17.35■□□□□ 0.37
Pcdh15-229ENSMUST00000155701 Trim41Q5NCC3 630 aa17.35■□□□□ 0.37
Pcdh15-229ENSMUST00000155701 Cecr2E9Q2Z1 1453 aa17.25■□□□□ 0.35
Pcdh15-229ENSMUST00000155701 HrcG5E8J6 738 aa17.19■□□□□ 0.34
Pcdh15-229ENSMUST00000155701 Brd4Q9ESU6 1400 aaKnown RBP17.09■□□□□ 0.33
Pcdh15-229ENSMUST00000155701 Cngb1E1AZ71 1325 aa17.08■□□□□ 0.33
Pcdh15-229ENSMUST00000155701 Synj1Q8CHC4 1574 aa17.01■□□□□ 0.31
Pcdh15-229ENSMUST00000155701 Esf1Q3V1V3 845 aaKnown RBP16.98■□□□□ 0.31
Pcdh15-229ENSMUST00000155701 CftrP26361 1476 aa16.91■□□□□ 0.3
Pcdh15-229ENSMUST00000155701 Smarca4Q3TKT4 1613 aaKnown RBP16.87■□□□□ 0.29
Pcdh15-229ENSMUST00000155701 Chic1Q8CBW7 227 aa16.85■□□□□ 0.29
Pcdh15-229ENSMUST00000155701 Golga3P55937 1487 aa16.82■□□□□ 0.28
Pcdh15-229ENSMUST00000155701 Ehmt2Q9Z148 1263 aaKnown RBP16.82■□□□□ 0.28
Pcdh15-229ENSMUST00000155701 Cttnbp2B9EJA2 1648 aa16.78■□□□□ 0.28
Pcdh15-229ENSMUST00000155701 Cep164Q5DU05 1446 aa16.78■□□□□ 0.28
Pcdh15-229ENSMUST00000155701 Rsf1E9PWW9 1441 aaKnown RBP16.78■□□□□ 0.28
Pcdh15-229ENSMUST00000155701 Gab3Q8BSM5 595 aa16.76■□□□□ 0.27
Pcdh15-229ENSMUST00000155701 Ccdc88bQ4QRL3 1481 aa16.73■□□□□ 0.27
Pcdh15-229ENSMUST00000155701 Iqgap2Q3UQ44 1575 aa16.7■□□□□ 0.26
Pcdh15-229ENSMUST00000155701 Atad2bE9Q166 1460 aaKnown RBP16.67■□□□□ 0.26
Pcdh15-229ENSMUST00000155701 Pds5bQ4VA53 1446 aaKnown RBP16.65■□□□□ 0.26
Pcdh15-229ENSMUST00000155701 Top2bQ64511 1612 aa16.6■□□□□ 0.25
Pcdh15-229ENSMUST00000155701 Cc2d2aQ8CFW7 1633 aa16.55■□□□□ 0.24
Pcdh15-229ENSMUST00000155701 Frmpd1A2AKB4 1549 aa16.43■□□□□ 0.22
Pcdh15-229ENSMUST00000155701 Fmn1Q05860 1466 aa16.41■□□□□ 0.22
Pcdh15-229ENSMUST00000155701 Wdr62Q3U3T8 1523 aa16.38■□□□□ 0.21
Pcdh15-229ENSMUST00000155701 Ercc6F8VPZ5 1481 aa16.37■□□□□ 0.21
Pcdh15-229ENSMUST00000155701 Acin1Q9JIX8 1338 aaKnown RBP16.33■□□□□ 0.21
Pcdh15-229ENSMUST00000155701 Il27Q8K3I6 234 aa16.29■□□□□ 0.2
Pcdh15-229ENSMUST00000155701 Top2aQ01320 1528 aaKnown RBP16.27■□□□□ 0.19
Pcdh15-229ENSMUST00000155701 Rpgrip1Q9EPQ2 1331 aa16.25■□□□□ 0.19
Pcdh15-229ENSMUST00000155701 Npm2Q80W85 207 aa16.24■□□□□ 0.19
Pcdh15-229ENSMUST00000155701 Kif15Q6P9L6 1387 aa16.24■□□□□ 0.19
Pcdh15-229ENSMUST00000155701 Myt1lP97500 1187 aa16.24■□□□□ 0.19
Pcdh15-229ENSMUST00000155701 Unc13aQ4KUS2 1712 aa16.21■□□□□ 0.19
Pcdh15-229ENSMUST00000155701 Rapgef2Q8CHG7 1496 aa16.18■□□□□ 0.18
Pcdh15-229ENSMUST00000155701 TnnQ80Z71 1560 aa16.16■□□□□ 0.18
Pcdh15-229ENSMUST00000155701 Ubl4bQ9CQ84 188 aa16.15■□□□□ 0.18
Pcdh15-229ENSMUST00000155701 Thoc2B1AZI6 1594 aaKnown RBP16.14■□□□□ 0.17
Pcdh15-229ENSMUST00000155701 Lamc3Q9R0B6 1581 aa16.14■□□□□ 0.17
Pcdh15-229ENSMUST00000155701 Phldb1Q6PDH0 1371 aaKnown RBP16.12■□□□□ 0.17
Pcdh15-229ENSMUST00000155701 Cep162Q6ZQ06 1403 aa16.09■□□□□ 0.17
Pcdh15-229ENSMUST00000155701 PtprkP35822 1457 aa16.02■□□□□ 0.16
Pcdh15-229ENSMUST00000155701 Camsap1A2AHC3 1581 aa16■□□□□ 0.15
Pcdh15-229ENSMUST00000155701 Cux2P70298 1426 aa16■□□□□ 0.15
Pcdh15-229ENSMUST00000155701 Npm1Q61937 292 aaKnown RBP15.99■□□□□ 0.15
Pcdh15-229ENSMUST00000155701 Ccdc18Q640L5 1455 aa15.99■□□□□ 0.15
Pcdh15-229ENSMUST00000155701 Zeb1Q64318 1117 aa15.98■□□□□ 0.15
Pcdh15-229ENSMUST00000155701 Dnajc5bQ9CQ94 199 aa15.97■□□□□ 0.15
Pcdh15-229ENSMUST00000155701 UbtfP25976 765 aaKnown RBP15.93■□□□□ 0.14
Pcdh15-229ENSMUST00000155701 Fam135aQ6NS59 1506 aa15.93■□□□□ 0.14
Pcdh15-229ENSMUST00000155701 Arhgap35Q91YM2 1499 aa15.9■□□□□ 0.14
Pcdh15-229ENSMUST00000155701 Grin2bQ01097 1482 aa15.89■□□□□ 0.13
Pcdh15-229ENSMUST00000155701 Mier1Q5UAK0 511 aa15.88■□□□□ 0.13
Pcdh15-229ENSMUST00000155701 Shroom4Q1W617 1475 aa15.88■□□□□ 0.13
Pcdh15-229ENSMUST00000155701 Eif4g1Q6NZJ6 1600 aaKnown RBP15.87■□□□□ 0.13
Pcdh15-229ENSMUST00000155701 NrkQ9R0G8 1455 aa15.87■□□□□ 0.13
Pcdh15-229ENSMUST00000155701 Clip1Q922J3 1391 aa15.87■□□□□ 0.13
Pcdh15-229ENSMUST00000155701 Ap3b1Q9Z1T1 1105 aa15.85■□□□□ 0.13
Pcdh15-229ENSMUST00000155701 Plekhg3Q4VAC9 1341 aa15.84■□□□□ 0.13
Pcdh15-229ENSMUST00000155701 LrpprcQ6PB66 1392 aaKnown RBP15.81■□□□□ 0.12
Pcdh15-229ENSMUST00000155701 Baz1bQ9Z277 1479 aa15.79■□□□□ 0.12
Pcdh15-229ENSMUST00000155701 Duox2A2AQ99 1517 aa15.74■□□□□ 0.11
Pcdh15-229ENSMUST00000155701 PogzQ8BZH4 1409 aaKnown RBP15.73■□□□□ 0.11
Pcdh15-229ENSMUST00000155701 Mroh2bQ7M6Y6 1581 aa15.73■□□□□ 0.11
Pcdh15-229ENSMUST00000155701 Dhx29Q6PGC1 1365 aaKnown RBP15.72■□□□□ 0.11
Pcdh15-229ENSMUST00000155701 Setd5Q5XJV7 1441 aa15.72■□□□□ 0.11
Pcdh15-229ENSMUST00000155701 Eea1Q8BL66 1411 aa15.71■□□□□ 0.11
Pcdh15-229ENSMUST00000155701 Efcab5A0JP43 1406 aa15.7■□□□□ 0.1
Pcdh15-229ENSMUST00000155701 Map3k1P53349 1493 aa15.69■□□□□ 0.1
Pcdh15-229ENSMUST00000155701 Mrc2Q64449 1479 aa15.68■□□□□ 0.1
Pcdh15-229ENSMUST00000155701 Arap1Q4LDD4 1452 aa15.66■□□□□ 0.1
Pcdh15-229ENSMUST00000155701 Kif21aQ9QXL2 1672 aa15.63■□□□□ 0.09
Pcdh15-229ENSMUST00000155701 Rad54l2Q99NG0 1466 aa15.62■□□□□ 0.09
Pcdh15-229ENSMUST00000155701 NefmP08553 848 aa15.61■□□□□ 0.09
Pcdh15-229ENSMUST00000155701 Samd9lQ69Z37 1561 aa15.61■□□□□ 0.09
Pcdh15-229ENSMUST00000155701 Carmil1Q6EDY6 1374 aa15.58■□□□□ 0.08
Pcdh15-229ENSMUST00000155701 Crocc2F6XLV1 1638 aa15.57■□□□□ 0.08
Pcdh15-229ENSMUST00000155701 Arhgef5E9Q7D5 1581 aa15.57■□□□□ 0.08
Pcdh15-229ENSMUST00000155701 Ankrd26Q811D2 1581 aa15.56■□□□□ 0.08
Pcdh15-229ENSMUST00000155701 AqrQ8CFQ3 1481 aaKnown RBP15.55■□□□□ 0.08
Pcdh15-229ENSMUST00000155701 Lmod2Q3UHZ5 550 aa15.55■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms