RNA–Protein interactions for RNA: ENSMUST00000115578.9

Ufd1-202, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ufd1, Length 2,078 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-202ENSMUST00000115578 Gm45140A0A0N4SUM8 220 aa13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Zkscan2G3X952 960 aa13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Dctn1O08788 1281 aa13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Sult6b1P0CC03 303 aa13.57□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Snapc4Q8BP86 1333 aa13.56□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Anapc15-psA0A140T8L6 141 aa13.56□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Vars2Q3U2A8 1060 aa13.56□□□□□ -0.24
Ufd1-202ENSMUST00000115578 NexnQ7TPW1 607 aa13.56□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Prune1Q8BIW1 454 aa13.56□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Ppp6r3Q922D4 844 aa13.56□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Ripk4Q9ERK0 786 aa13.56□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Cfap44E9Q5M6 1843 aa13.56□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Hmox1P14901 289 aa13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Pdia3P27773 505 aaKnown RBP13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Zbtb38Q3LR78 1197 aa13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Ifit1bl2Q3U687 466 aa13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Srp68Q8BMA6 625 aaKnown RBP13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 4931408C20RikE9PWP9 1381 aa13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Hoxa7P02830 229 aa13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Q8C5K5 320 aa13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 HmcesQ8R1M0 353 aaKnown RBP13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Taf5lQ91WQ5 589 aa13.55□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Npy5rO70342 466 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Irf5P56477 497 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Nucb1Q02819 459 aaKnown RBP13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 DbnlQ62418 436 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Unc5clQ6R653 518 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Smc4Q8CG47 1286 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Bag4Q8CI61 457 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Tmc2Q8R4P4 888 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Trim34aQ99PP6 485 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Tktl2Q9D4D4 627 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Nlrp1aQ2LKU9 1182 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Zbtb45Q52KG4 520 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Zkscan1Q8BGS3 561 aaKnown RBP13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Fam102bQ8BQS4 339 aa13.54□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Kif13bA0A286YCV9 1847 aa13.53□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Eya2O08575 532 aa13.53□□□□□ -0.24
Ufd1-202ENSMUST00000115578 BcanQ61361 883 aa13.53□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Sf3a1Q8K4Z5 791 aaKnown RBP13.53□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Adamtsl1Q8BLI0 1745 aa13.53□□□□□ -0.24
Ufd1-202ENSMUST00000115578 NcapgE9PWG6 1004 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Pdia4P08003 638 aaKnown RBP13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 AppP12023 770 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Cyp7a1Q64505 503 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Ppp4r3aQ6P2K6 820 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Ankrd13dQ6PD24 605 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Slc26a8Q8R0C3 999 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Ncoa5Q91W39 579 aaKnown RBP13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Ciao1Q99KN2 339 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 RtcbQ99LF4 505 aaKnown RBP13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Q9D2X8 372 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 NgdnQ9DB96 315 aaKnown RBP13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Ubn2Q80WC1 1314 aa13.52□□□□□ -0.24
Ufd1-202ENSMUST00000115578 Zfyve9A2A8R0 1397 aa13.52□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Scn11aQ9R053 1765 aa13.52□□□□□ -0.25
Ufd1-202ENSMUST00000115578 NfkbibQ60778 359 aa13.52□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Tmem132aQ922P8 1018 aa13.52□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Bag3Q9JLV1 577 aaKnown RBP13.52□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Stox1B2RQL2 990 aa13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Gpr182P43142 395 aa13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Pim2Q62070 370 aa13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Tbc1d4Q8BYJ6 1307 aa13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Rfx1P48377 963 aa13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Tlr8P58682 1032 aa13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Zc3h12cQ5DTV4 884 aa13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Rbm27Q5SFM8 1060 aaKnown RBP13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Noc3lQ8VI84 807 aaKnown RBP13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Rrs1Q9CYH6 365 aaKnown RBP13.51□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Nphp3Q7TNH6 1325 aa13.5□□□□□ -0.25
Ufd1-202ENSMUST00000115578 CltaO08585 235 aa13.5□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Anxa1P10107 346 aaKnown RBP13.5□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Kif3aP28741 701 aa13.5□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Ftl2P49945 183 aa13.5□□□□□ -0.25
Ufd1-202ENSMUST00000115578 EspnlQ3UYR4 1005 aa13.5□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Znfx1Q8R151 1909 aaKnown RBP13.5□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Togaram1Q6A070 1776 aaKnown RBP13.5□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Slc38a10Q5I012 1090 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Itga6Q61739 1091 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Kdm4aQ8BW72 1064 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Ccdc173A0JLY1 547 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 PtmaP26350 111 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Neurod6P48986 337 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Nol8Q3UHX0 1147 aaKnown RBP13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Rps6ka5Q8C050 863 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Mknk2Q8CDB0 459 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Chmp3Q9CQ10 224 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 4931400O07RikQ9D4M5 137 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Mapk8ip1Q9WVI9 707 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Spata31d1bE9QA57 1361 aa13.49□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Trim34bJ3QNR8 485 aa13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Timm10P62073 90 aa13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Nol10Q5RJG1 687 aaKnown RBP13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Brf1Q8CFK2 676 aa13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Amhr2Q8K592 568 aa13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Erich6bQ9D4S6 220 aa13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Fam198bQ3UPI1 517 aa13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Rnf123Q5XPI3 1314 aa13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 ZyxQ62523 564 aa13.48□□□□□ -0.25
Ufd1-202ENSMUST00000115578 Col4a5Q63ZW6 1691 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms