RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Ccdc14Q8K2J4 934 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 ApobrQ8VBT6 942 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 AdnpQ9Z103 1108 aaKnown RBP12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ccdc141E9Q8Q6 1531 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Cdr2P97817 455 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ccdc157Q5SPX1 718 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Luc7l2Q7TNC4 392 aaKnown RBP12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Irx4Q9QY61 515 aa12.17□□□□□ -0.46
Vcan-202ENSMUST00000109544 Gm7298A0A0N4SVU1 1476 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Zfp213E9QAW0 468 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Speer4dL7N216 212 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ppp1r10Q80W00 888 aaKnown RBP12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Znf394Q9Z1D9 521 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 EappQ5BU09 281 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Tacc2Q9JJG0 1149 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Arap1Q4LDD4 1452 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Dzip1lQ499E4 774 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 U2af1l4Q8BGJ9 220 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Cfap57Q9D180 1249 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ttc21bQ0HA38 1315 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 P4ha1Q60715 534 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Map3k11Q80XI6 850 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Pym1Q8CHP5 203 aaKnown RBP12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 JmyQ9QXM1 983 aa12.16□□□□□ -0.46
Vcan-202ENSMUST00000109544 Stmn2P55821 179 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Atad3Q925I1 591 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Krt77Q6IFZ6 572 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ankle2Q6P1H6 964 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Arhgap24Q8C4V1 747 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Chd1lQ9CXF7 900 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Ncoa1P70365 1447 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 HellsQ60848 821 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Camsap2Q8C1B1 1461 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Eps15P42567 897 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Tbc1d31Q6NXY1 996 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Tbc1d5Q80XQ2 815 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Krt25Q8VCW2 446 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Fam114a1Q9D281 569 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Echdc1Q9D9V3 322 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 WtapQ9ER69 396 aa12.15□□□□□ -0.46
Vcan-202ENSMUST00000109544 Evi5lH3BKQ3 813 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Rnf216P58283 853 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Golga1Q9CW79 758 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Efhd1Q9D4J1 240 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Golga5Q9QYE6 729 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Calm1P0DP26 149 aaKnown RBP12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Calm2P0DP27 149 aaKnown RBP12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Calm3P0DP28 149 aaKnown RBP12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Smarcad1Q04692 1021 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Hdac9Q99N13 588 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Gjc1P28229 396 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Sptlc2P97363 560 aaKnown RBP12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Soga3Q6NZL0 945 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Fam160b2Q80YR2 744 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Jmjd4Q8BFT6 427 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Atp1a4Q9WV27 1032 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Pde3aQ9Z0X4 1141 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Aldh8a1Q8BH00 487 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Matr3Q8K310 846 aaKnown RBP12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Vps16Q920Q4 839 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Il1rapl2Q9ERS6 686 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Cacna2d3Q9Z1L5 1091 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ppip5k1A2ARP1 1436 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Zmym3Q9JLM4 1370 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Rfx7F8VPJ6 1459 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ccdc129Q14B48 1034 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Fam204aQ8C6C7 236 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Gtpbp10Q8K013 366 aa12.14□□□□□ -0.47
Vcan-202ENSMUST00000109544 Vps41Q5KU39 853 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Naa25Q8BWZ3 972 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Dnm1P39053 867 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 TchpQ3TVW5 497 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 SncbQ91ZZ3 133 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 SarnpQ9D1J3 210 aaKnown RBP12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Sept14Q9DA97 430 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Iqgap2Q3UQ44 1575 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ltv1Q6NSQ7 470 aaKnown RBP12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Tmem132aQ922P8 1018 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Letm1Q9Z2I0 738 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Hoxb7P09024 217 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Triml1Q8BVP1 470 aa12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ddx27Q921N6 760 aaKnown RBP12.13□□□□□ -0.47
Vcan-202ENSMUST00000109544 Myd88P22366 296 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Nsrp1Q5NCR9 542 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ankrd40Q5SUE8 363 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Cavin2Q63918 418 aaKnown RBP12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Trak2Q6P9N8 913 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 IqceQ6PCQ0 778 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Plekho1Q9JIY0 408 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Bicdl1A0JNT9 577 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Speer4f2E9Q366 295 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Pabpn1lQ5XFR0 273 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Kiaa1328Q6NZK5 612 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 DlatQ8BMF4 642 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Adcy3Q8VHH7 1145 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Usp11Q99K46 921 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Tldc2A2ACG1 198 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Synpo2Q91YE8 1087 aaKnown RBP12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Prr29B1ARI9 187 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 TrdnE9Q9K5 693 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms