RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 LlphQ9D945 130 aaKnown RBP17.86■□□□□ 0.45
Nup88-202ENSMUST00000108530 MecomP14404 1042 aa17.85■□□□□ 0.45
Nup88-202ENSMUST00000108530 VeztQ3ZK22 780 aa17.85■□□□□ 0.45
Nup88-202ENSMUST00000108530 Itga6Q61739 1091 aa17.85■□□□□ 0.45
Nup88-202ENSMUST00000108530 Htatsf1Q8BGC0 757 aa17.85■□□□□ 0.45
Nup88-202ENSMUST00000108530 Slx4ipQ9D7Y9 413 aa17.85■□□□□ 0.45
Nup88-202ENSMUST00000108530 Trim34bJ3QNR8 485 aa17.84■□□□□ 0.45
Nup88-202ENSMUST00000108530 Anapc15P60007 132 aa17.84■□□□□ 0.45
Nup88-202ENSMUST00000108530 Pdzrn3Q69ZS0 1063 aa17.84■□□□□ 0.45
Nup88-202ENSMUST00000108530 Asap2Q7SIG6 958 aa17.84■□□□□ 0.45
Nup88-202ENSMUST00000108530 Mapk8ip1Q9WVI9 707 aa17.84■□□□□ 0.45
Nup88-202ENSMUST00000108530 Ccne2Q9Z238 404 aa17.84■□□□□ 0.45
Nup88-202ENSMUST00000108530 Bin2D3Z6Q9 489 aa17.83■□□□□ 0.45
Nup88-202ENSMUST00000108530 4930523C07RikE9Q2T4 99 aa17.83■□□□□ 0.45
Nup88-202ENSMUST00000108530 Casq1O09165 405 aa17.83■□□□□ 0.45
Nup88-202ENSMUST00000108530 Snai1Q02085 264 aa17.83■□□□□ 0.45
Nup88-202ENSMUST00000108530 Kiaa0319lQ8K135 1048 aa17.83■□□□□ 0.45
Nup88-202ENSMUST00000108530 Antxr1Q9CZ52 562 aa17.83■□□□□ 0.45
Nup88-202ENSMUST00000108530 Greb1lB9EJV3 1913 aa17.83■□□□□ 0.45
Nup88-202ENSMUST00000108530 Rbm8a2A0A0N4SUH6 174 aa17.83■□□□□ 0.44
Nup88-202ENSMUST00000108530 F2rP30558 430 aa17.83■□□□□ 0.44
Nup88-202ENSMUST00000108530 Dmrt2Q8BG36 561 aa17.83■□□□□ 0.44
Nup88-202ENSMUST00000108530 Rbm8aQ9CWZ3 174 aa17.83■□□□□ 0.44
Nup88-202ENSMUST00000108530 Atp1b3P97370 278 aa17.82■□□□□ 0.44
Nup88-202ENSMUST00000108530 Rsph3aQ3UFY4 516 aa17.82■□□□□ 0.44
Nup88-202ENSMUST00000108530 AnlnQ8K298 1121 aaKnown RBP17.82■□□□□ 0.44
Nup88-202ENSMUST00000108530 ZyxQ62523 564 aa17.82■□□□□ 0.44
Nup88-202ENSMUST00000108530 Krt25Q8VCW2 446 aa17.82■□□□□ 0.44
Nup88-202ENSMUST00000108530 Tktl2Q9D4D4 627 aa17.82■□□□□ 0.44
Nup88-202ENSMUST00000108530 Ak2Q9WTP6 239 aa17.82■□□□□ 0.44
Nup88-202ENSMUST00000108530 Ugt1a5B2RT14 529 aa17.81■□□□□ 0.44
Nup88-202ENSMUST00000108530 Srp68Q8BMA6 625 aaKnown RBP17.81■□□□□ 0.44
Nup88-202ENSMUST00000108530 Zcrb1Q9CZ96 217 aaKnown RBP17.81■□□□□ 0.44
Nup88-202ENSMUST00000108530 Sh3bp5Q9Z131 463 aa17.81■□□□□ 0.44
Nup88-202ENSMUST00000108530 Gjb2Q00977 226 aa17.81■□□□□ 0.44
Nup88-202ENSMUST00000108530 Zc3h12cQ5DTV4 884 aa17.81■□□□□ 0.44
Nup88-202ENSMUST00000108530 Add2Q9QYB8 725 aa17.81■□□□□ 0.44
Nup88-202ENSMUST00000108530 IncenpQ9WU62 880 aa17.81■□□□□ 0.44
Nup88-202ENSMUST00000108530 Vwa3bJ9JI28 736 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 SowahdQ8BY98 327 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 Afg3l2Q8JZQ2 802 aaKnown RBP17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 Popdc2Q9ES82 367 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 Arhgap33Q80YF9 1305 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 CltaO08585 235 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 Atp2b3Q0VF55 1220 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 Nphp3Q7TNH6 1325 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 Ubxn10Q8BG34 277 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 Lmbrd2Q8C561 694 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 Gdpd2Q9ESM6 539 aa17.8■□□□□ 0.44
Nup88-202ENSMUST00000108530 TnksQ6PFX9 1320 aa17.79■□□□□ 0.44
Nup88-202ENSMUST00000108530 Stox1B2RQL2 990 aa17.79■□□□□ 0.44
Nup88-202ENSMUST00000108530 TsksO54887 585 aa17.79■□□□□ 0.44
Nup88-202ENSMUST00000108530 Cyp2d10P24456 504 aa17.79■□□□□ 0.44
Nup88-202ENSMUST00000108530 Atp8a2P98200 1148 aa17.79■□□□□ 0.44
Nup88-202ENSMUST00000108530 Tmem266Q8BZB3 538 aa17.79■□□□□ 0.44
Nup88-202ENSMUST00000108530 Cdca7lQ922M5 438 aa17.79■□□□□ 0.44
Nup88-202ENSMUST00000108530 Ric1Q69ZJ7 1422 aa17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Mybbp1aQ7TPV4 1344 aaKnown RBP17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Ddit3P35639 168 aa17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Slc38a10Q5I012 1090 aa17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Sugp2Q8CH09 1067 aa17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Rbm17Q8JZX4 405 aaKnown RBP17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Tceanc2Q8R2M0 207 aa17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Polr3dQ91WD1 398 aa17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 StrbpQ91WM1 672 aaKnown RBP17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Lama4P97927 1816 aa17.78■□□□□ 0.44
Nup88-202ENSMUST00000108530 Utp18Q5SSI6 552 aaKnown RBP17.77■□□□□ 0.44
Nup88-202ENSMUST00000108530 Mb21d2Q8C525 428 aa17.77■□□□□ 0.44
Nup88-202ENSMUST00000108530 4931408C20RikE9PWP9 1381 aa17.77■□□□□ 0.44
Nup88-202ENSMUST00000108530 Lrrc43Q3V0L5 667 aa17.77■□□□□ 0.44
Nup88-202ENSMUST00000108530 EappQ5BU09 281 aa17.77■□□□□ 0.44
Nup88-202ENSMUST00000108530 Amer1Q7TS75 1132 aa17.77■□□□□ 0.44
Nup88-202ENSMUST00000108530 Pof1bQ8K4L4 587 aa17.77■□□□□ 0.44
Nup88-202ENSMUST00000108530 Filip1lQ6P6L0 1131 aa17.76■□□□□ 0.43
Nup88-202ENSMUST00000108530 Sptlc3Q8BG54 563 aa17.76■□□□□ 0.43
Nup88-202ENSMUST00000108530 Pde8bE9Q4S1 865 aa17.76■□□□□ 0.43
Nup88-202ENSMUST00000108530 Tti2Q8BGV4 512 aa17.76■□□□□ 0.43
Nup88-202ENSMUST00000108530 Prr29B1ARI9 187 aa17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Pde4bB1AWC9 736 aa17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 HmcesQ8R1M0 353 aaKnown RBP17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Bmp2kQ91Z96 1138 aa17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Kdm3aQ6PCM1 1323 aa17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Snrpa1P57784 255 aaKnown RBP17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Ints3Q7TPD0 1041 aaKnown RBP17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Sgsm2Q80U12 1005 aa17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Zkscan1Q8BGS3 561 aaKnown RBP17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Nek11Q8C0Q4 628 aa17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Bloc1s4Q8VED2 215 aa17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Dbndd1Q9CZ00 160 aa17.75■□□□□ 0.43
Nup88-202ENSMUST00000108530 Plcb2A3KGF7 1181 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Lrrfip2Q91WK0 415 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Rdm1Q9CQK3 281 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Rufy3Q9D394 469 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Cyp3a57D3YYZ0 503 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Spryd3E9Q9B3 442 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Tlr8P58682 1032 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Kank4Q6P9J5 1016 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Ssh1Q76I79 1042 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 Plekho1Q9JIY0 408 aa17.74■□□□□ 0.43
Nup88-202ENSMUST00000108530 GalcP54818 684 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms