RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ndufa8Q9DCJ5 172 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Magi3Q9EQJ9 1476 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Myo5cE9Q1F5 1742 aa11.29□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Psme1P97371 249 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 TxlnaQ6PAM1 554 aaKnown RBP11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Nap1l3Q794H2 544 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Evc2Q8K1G2 1220 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Smc3Q9CW03 1217 aaKnown RBP11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Cc2d2bA0A286YDU8 1405 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Usp5P56399 858 aaKnown RBP11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Plekhm2Q80TQ5 1018 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Rab11fip3Q8CHD8 1047 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Gtpbp10Q8K013 366 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 BlmhQ8R016 455 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Tlr9Q9EQU3 1032 aa11.28□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Fam71bQ5STT6 665 aa11.27□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Bag1Q60739 355 aa11.27□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 HrQ61645 1182 aa11.27□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 ErmapQ9JLN5 566 aa11.27□□□□□ -0.6
Hmgb1-201ENSMUST00000085546 Ino80Q6ZPV2 1559 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 PrphP15331 475 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Evi5P97366 809 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ric8aQ3TIR3 530 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ppp1r7Q3UM45 361 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Chpf2Q3UU43 768 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Tbc1d1Q60949 1255 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 PsapQ61207 557 aaKnown RBP11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Npm1Q61937 292 aaKnown RBP11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Hps6Q8BLY7 805 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ppp4r3bQ922R5 820 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Cnpy2Q9QXT0 182 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Sh3bgrQ9WUZ7 214 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Stat2Q9WVL2 923 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Nos1Q9Z0J4 1429 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 EmbP21995 330 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Smarcc1P97496 1104 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Lrrc42Q8R2U7 421 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Cyp46a1Q9WVK8 500 aa11.27□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Rnf20Q5DTM8 973 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Exoc8Q6PGF7 716 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Iqcb1Q8BP00 598 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 PreplQ8C167 725 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Rab3il1Q8VDV3 383 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 U2af1Q9D883 239 aaKnown RBP11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ccdc97Q9DBT3 340 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Plagl1Q9JLQ4 704 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Plxnc1Q9QZC2 1574 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Stx1aO35526 288 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Tm6sf1P58749 370 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Emc10Q3TAS6 258 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Mum1l1Q4VA55 681 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Slc30a9Q5IRJ6 567 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Aldh1l2Q8K009 923 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ssh3Q8K330 649 aa11.26□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Clec11aO88200 328 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Rps6ka6Q7TPS0 764 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Mei4Q8BRM6 389 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Lztr1Q9CQ33 837 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Mad1l1Q9WTX8 717 aaKnown RBP11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Abca16E9PWJ7 1678 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Kif13aQ9EQW7 1749 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Atp7bQ64446 1462 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Nlrp4fQ66X05 959 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Tsen2Q6P7W5 460 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Zbtb40Q6PCS8 1258 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ubxn4Q8VCH8 506 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Pes1Q9EQ61 584 aaKnown RBP11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Clip2Q9Z0H8 1047 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 ErbinQ80TH2 1402 aa11.25□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 CoblQ5NBX1 1337 aaKnown RBP11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Zkscan2G3X952 960 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Gtf2f1Q3THK3 508 aaKnown RBP11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Esyt3Q5DTI8 891 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Cdc37Q61081 379 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Dhx40Q6PE54 779 aaKnown RBP11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Fam13aQ8BGI4 693 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Fam163aQ8CAA5 168 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 RestQ8VIG1 1082 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Msantd4Q91YU3 345 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Slx4ipQ9D7Y9 413 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ptch1Q61115 1434 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Cavin4A2AMM0 362 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Sema3fO88632 785 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Camsap3Q80VC9 1252 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 RabggtaQ9JHK4 567 aa11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Zcchc11B2RX14 1644 aaKnown RBP11.24□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ubap1lG3UW59 384 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Cnnm3Q32NY4 713 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Phactr4Q501J7 694 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Eif2ak4Q9QZ05 1648 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Atg4a-psA0A0G2JFS9 396 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ms4a2P20490 235 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Iws1Q8C1D8 766 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Atg4aQ8C9S8 396 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Knl1Q66JQ7 1612 aa11.23□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Syt1P46096 421 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ccdc66Q6NS45 935 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Trim6Q8BGE7 488 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Krt222Q8CCX5 294 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Znf445Q8R2V3 986 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms