RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Hspa1lP16627 641 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Ints3Q7TPD0 1041 aaKnown RBP10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 KinQ8K339 391 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Ccdc7Q9D541 371 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Sh3bp5Q9Z131 463 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 AtrnQ9WU60 1428 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Kcnb2A6H8H5 907 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Prl7a2O54831 253 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Usp48Q3V0C5 1052 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Sgsm2Q80U12 1005 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Mb21d2Q8C525 428 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Trip6Q9Z1Y4 480 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Cyp2c23E9Q5K4 494 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Syt1P46096 421 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Ddb1Q3U1J4 1140 aaKnown RBP10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 ZyxQ62523 564 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Zkscan8Q8BSL0 588 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Zbtb22Q9Z0G7 638 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Erbb4Q61527 1308 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Prl3d2F6R3P9 224 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Cops6O88545 324 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 NfkbibQ60778 359 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Hand2Q61039 217 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Fam170aQ66LM6 333 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Tmx3Q8BXZ1 456 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Q9D9S1 216 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Ehd4Q9EQP2 541 aa10.13□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Prr5lA2AVJ5 370 aa10.12□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Ftl2P49945 183 aa10.12□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Sf3b2Q3UJB0 878 aaKnown RBP10.12□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Cyp7a1Q64505 503 aa10.12□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Emilin1Q99K41 1017 aa10.12□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 PappaQ8R4K8 1624 aa10.12□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Tom1O88746 492 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Ctdnep1Q3TP92 244 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Rbm27Q5SFM8 1060 aaKnown RBP10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Jmjd4Q8BFT6 427 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Susd4Q8BH32 490 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Nlrp3Q8R4B8 1033 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Mylk2Q8VCR8 613 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Irx3P81067 507 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Nlrp1aQ2LKU9 1182 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Shisa4Q8CA71 197 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Tktl2Q9D4D4 627 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Zeb2Q9R0G7 1215 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 TnksQ6PFX9 1320 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 GakQ99KY4 1305 aa10.11□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Cyp2d34L7N463 504 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Nol10Q5RJG1 687 aaKnown RBP10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Asap2Q7SIG6 958 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 St18Q80TY4 1045 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Fam102bQ8BQS4 339 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Smc3Q9CW03 1217 aaKnown RBP10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Mad1l1Q9WTX8 717 aaKnown RBP10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Sipa1l3G3X9J0 1776 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Syce3B5KM66 88 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Bach1P97302 739 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Ppp4r3aQ6P2K6 820 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Slf2Q6P9P0 1278 aa10.1□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Bin2D3Z6Q9 489 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Slurp2P0DP59 97 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Kif20aP97329 887 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Edrf1Q6GQV7 1239 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Rnf214Q8BFU3 668 aaKnown RBP10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 AbraQ8BUZ1 375 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Klc3Q91W40 508 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Tbc1d7Q9D0K0 293 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Cyp2d9P11714 504 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Esco1Q69Z69 843 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Sptlc3Q8BG54 563 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Rps6kb1Q8BSK8 525 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Krt25Q8VCW2 446 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Rapgef4Q9EQZ6 1011 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Nwd2Q6P5U7 1742 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Irgm2A0A140LIF8 407 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Itga6Q61739 1091 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Lmod1Q8BVA4 595 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Nek11Q8C0Q4 628 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Smc4Q8CG47 1286 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Atf7Q8R0S1 413 aa10.09□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Cd22P35329 862 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Atp2b3Q0VF55 1220 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Ifit1Q64282 463 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Pram1Q6BCL1 675 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Rhot2Q8JZN7 620 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 CpvlQ9D3S9 478 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Stx6Q9JKK1 255 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Foxo4Q9WVH3 505 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 MetP16056 1379 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Smarce1O54941 411 aaKnown RBP10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Cct2P80314 535 aaKnown RBP10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Zbtb38Q3LR78 1197 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Gtf3c3Q3TMP1 882 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Ifit1bl2Q3U687 466 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 TrhQ62361 256 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Ccdc66Q6NS45 935 aa10.08□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Nphp3Q7TNH6 1325 aa10.07□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Hspd1P63038 573 aaKnown RBP10.07□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Gsdma2Q32M21 443 aa10.07□□□□□ -0.8
Ptchd1-201ENSMUST00000038665 Spty2d1Q68FG3 682 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms