RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Golga5Q9QYE6 729 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Samsn1P57725 372 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Ubash3aQ3V3E1 624 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Fam228bQ497Q6 232 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 L1td1Q587J6 782 aaKnown RBP11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Tpm4Q6IRU2 248 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Atf7Q8R0S1 413 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Ptpn23Q6PB44 1692 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Itsn1Q9Z0R4 1714 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Prr29B1ARI9 187 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Mns1Q61884 491 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Hook1Q8BIL5 728 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Q8BZJ8 459 aa11.65□□□□□ -0.54
Nedd1-201ENSMUST00000020163 Astn2Q80Z10 1352 aa11.65□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Usp28Q5I043 1051 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Ano1Q8BHY3 960 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Rps6kb1Q8BSK8 525 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Zfp317Q8C0Q5 607 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Mtmr3Q8K296 1196 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Frat2Q8K025 231 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Atg3Q9CPX6 314 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Tnrc6bQ8BKI2 1810 aaKnown RBP11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Dhx8A2A4P0 1244 aaKnown RBP11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Samd1D3YXK1 519 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Pcdhb15Q91Y04 786 aa11.64□□□□□ -0.55
Nedd1-201ENSMUST00000020163 TrdnE9Q9K5 693 aa11.63□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Afap1Q80YS6 731 aa11.63□□□□□ -0.55
Nedd1-201ENSMUST00000020163 ChmQ9QXG2 665 aa11.63□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Rfc1P35601 1131 aa11.63□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Calcoco2A2A6M5 331 aa11.63□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Adck5Q80V03 582 aa11.63□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Dnm3Q8BZ98 863 aa11.63□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Iqca1Q9CUL5 857 aa11.63□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Parp14Q2EMV9 1817 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Ctdnep1Q3TP92 244 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Rnf20Q5DTM8 973 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Dusp10Q9ESS0 483 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Zc3h13E9Q784 1729 aaKnown RBP11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Abcc4E9Q236 1325 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Ccdc112A0AUP1 442 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Cyp2d11P24457 504 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Map9Q3TRR0 646 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Polr3dQ91WD1 398 aa11.62□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Atp2b1G5E829 1220 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Snap23O09044 210 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 RubcnlQ3TD16 648 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Ccdc102aQ3TMW1 549 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Etf1Q8BWY3 437 aaKnown RBP11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Golph3lQ8R088 285 aaKnown RBP11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Ugt1a5B2RT14 529 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Stat1P42225 749 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Tlr7P58681 1050 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Slc4a10Q5DTL9 1118 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Pik3c2bE9QAN8 1632 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 XpcP51612 930 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Cdc37Q61081 379 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Kiaa1524Q8BWY9 907 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Tada3Q8R0L9 432 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Fam76aQ922G2 307 aa11.61□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Cnksr1A2A9K7 700 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Klra1P20937 262 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Ppp1r10Q80W00 888 aaKnown RBP11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Tceanc2Q8R2M0 207 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Xpo4Q9ESJ0 1151 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Hmg20bQ9Z104 317 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Cps1Q8C196 1500 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Exoc6bA6H5Z3 810 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 CoilQ5SU73 570 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Ddx27Q921N6 760 aaKnown RBP11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Fbxl16A2RT62 479 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Plcb3P51432 1234 aaKnown RBP11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Mcm6P97311 821 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Uri1Q3TLD5 531 aa11.6□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Dlg5E9Q9R9 1921 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Btn2a2A4QPC6 514 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Chpf2Q3UU43 768 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Wdr3Q8BHB4 942 aaKnown RBP11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Ubr1O70481 1757 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Nup153E9Q3G8 1462 aaKnown RBP11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Aox2Q5SGK3 1345 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Actn3O88990 900 aaKnown RBP11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Cyp2d12Q8BVD2 504 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Q8CEZ4 452 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Bend3Q6PAL0 825 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Gpatch3Q8BIY1 525 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Mei4Q8BRM6 389 aa11.59□□□□□ -0.55
Nedd1-201ENSMUST00000020163 Tcof1O08784 1320 aaKnown RBP11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Smarcc2Q6PDG5 1213 aa11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Vps18Q8R307 973 aa11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Cep89Q9CZX2 791 aa11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Map2P20357 1828 aa11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 1700017N19RikA0A087WPJ1 469 aa11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Spata16Q8C636 571 aa11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Efcab8Q8C9R9 203 aa11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Sox30Q8CGW4 782 aa11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 CoblQ5NBX1 1337 aaKnown RBP11.58□□□□□ -0.56
Nedd1-201ENSMUST00000020163 FntaQ61239 377 aa11.57□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Dact1Q8R4A3 778 aa11.57□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Smc1aQ9CU62 1233 aaKnown RBP11.57□□□□□ -0.56
Nedd1-201ENSMUST00000020163 Cwc15Q9JHS9 229 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms