RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Spon2Q8BMS2 330 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cmtm4Q8CJ61 208 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 NansQ99J77 359 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mrpl15Q9CPR5 295 aaKnown RBP12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fkbp1bQ9Z2I2 108 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Scgb2b3D2XZ38 112 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp282E9PVC2 666 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gm3594E9Q2A7 267 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ms4a7E9Q9V5 267 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ms4a18J3QN01 344 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Nme6O88425 189 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Brd7O88665 651 aaKnown RBP12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 RrasP10833 218 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Adh5P28474 374 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Hoxa10P31310 416 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Acsl1P41216 699 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tead3P70210 439 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Atp5a1Q03265 553 aaKnown RBP12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dcst1Q059Y8 732 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Bcl2a1Q07440 172 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Clcn4Q61418 747 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gpr68Q8BFQ3 365 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cnksr3Q8BMA3 555 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Hat1Q8BY71 416 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc25a21Q8BZ09 298 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 TigarQ8BZA9 269 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Chrna3Q8R4G9 499 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tmem242Q8VCR3 140 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tmem5Q8VDX6 444 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr1261Q8VFB0 306 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 AplfQ9D842 499 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ca5bQ9QZA0 317 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 UxtQ9WTZ0 157 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Vmn1r90A0A087WR36 309 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Morn1A2RTS7 477 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 9630041A04RikD3Z3U4 205 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr655E9Q252 308 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Msl3l2G3X992 371 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Socs1O35716 212 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Csnk2a2O54833 350 aaKnown RBP12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Pcdh12O55134 1180 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Creg1O88668 220 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fgf18O89101 207 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 P03987 398 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Evx2P49749 475 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rab33aP97950 237 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dus4lQ32M08 324 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Kcnk6Q3TBV4 313 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Bbs1Q3V3N7 593 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Grxcr1Q50H32 290 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gpr39Q5U431 456 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 NraddQ8CJ26 228 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp119bQ8K0G9 543 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc9a8Q8R4D1 576 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zmynd11Q8R5C8 602 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Hrh4Q91ZY2 391 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mpc2Q9D023 127 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Copz2Q9JHH9 205 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Clec1bQ9JL99 229 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Syt8Q9R0N6 395 aa12.47□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mki67E9PVX6 3177 aaKnown RBP12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Kif26bQ7TNC6 2112 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tcrg-V3A0A0G2JEW2 117 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Scml2B1AVB3 969 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mfsd4b5E9PYY6 479 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 CatsperdE9Q9F6 805 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 PrnpP04925 254 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cox4i1P19783 169 aaKnown RBP12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 P2rx1P51576 399 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tra2bP62996 288 aaKnown RBP12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 4930480E11RikQ0VG34 394 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Fam219bQ14DQ1 197 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mrpl10Q3TBW2 262 aaKnown RBP12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Nxpe2Q3U095 558 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dhrs11Q3U0B3 260 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 LpoQ5SW46 710 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Sntb2Q61235 520 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Il10raQ61727 575 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Znf728Q6P5C7 752 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tha1Q6XPS7 400 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr1231Q7TQZ8 313 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Adamtsl2Q7TSK7 957 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Lrrtm4Q80XG9 590 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Lrrc39Q8BGI7 337 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mettl21eQ8CDZ2 244 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 GmdsQ8K0C9 372 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ubqln1Q8R317 582 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cd207Q8VBX4 331 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ccm2lQ8VCC6 481 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dhcr24Q8VCH6 516 aaKnown RBP12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mrps23Q8VE22 177 aaKnown RBP12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr952Q8VFD7 314 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr525Q8VGL5 309 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Q91W34 466 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 GpnmbQ99P91 574 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gid4Q9CPY6 217 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rab3bQ9CZT8 219 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr955Q9EQ97 314 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Sp6Q9ESX2 376 aa12.46□□□□□ -0.41
Nup88-201ENSMUST00000035283 Adat1Q9JHI2 499 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms