Protein–RNA interactions for Protein: P41216

Acsl1, Long-chain-fatty-acid--CoA ligase 1, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Acsl1P41216 Gm25239-201ENSMUST00000174915 86 ntBASIC46.08■■■■■ 4.97
Acsl1P41216 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.95■■■■■ 4.47
Acsl1P41216 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.24■■■■■ 4.35
Acsl1P41216 Gm24109-201ENSMUST00000175489 103 ntBASIC40.31■■■■■ 4.04
Acsl1P41216 Gm15042-201ENSMUST00000120212 883 ntBASIC39.61■■■■□ 3.93
Acsl1P41216 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.94■■■■□ 3.82
Acsl1P41216 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
Acsl1P41216 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
Acsl1P41216 Gm15045-201ENSMUST00000117359 883 ntBASIC38.6■■■■□ 3.77
Acsl1P41216 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Acsl1P41216 Gm23366-201ENSMUST00000175022 89 ntBASIC38.4■■■■□ 3.74
Acsl1P41216 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.82■■■■□ 3.64
Acsl1P41216 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.5■■■■□ 3.59
Acsl1P41216 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
Acsl1P41216 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.39■■■■□ 3.58
Acsl1P41216 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Acsl1P41216 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
Acsl1P41216 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Acsl1P41216 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.69■■■■□ 3.46
Acsl1P41216 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.65■■■■□ 3.46
Acsl1P41216 Gm25238-201ENSMUST00000174914 89 ntBASIC36.58■■■■□ 3.45
Acsl1P41216 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Acsl1P41216 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.84■■■■□ 3.33
Acsl1P41216 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
Acsl1P41216 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Acsl1P41216 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
Acsl1P41216 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.58■■■■□ 3.29
Acsl1P41216 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Acsl1P41216 Gm25262-201ENSMUST00000174934 133 ntBASIC35.4■■■■□ 3.26
Acsl1P41216 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Acsl1P41216 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.31■■■■□ 3.24
Acsl1P41216 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.23■■■■□ 3.23
Acsl1P41216 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Acsl1P41216 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.99■■■■□ 3.19
Acsl1P41216 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.92■■■■□ 3.18
Acsl1P41216 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Acsl1P41216 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
Acsl1P41216 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.88■■■■□ 3.17
Acsl1P41216 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.87■■■■□ 3.17
Acsl1P41216 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.86■■■■□ 3.17
Acsl1P41216 Gm26115-201ENSMUST00000175605 87 ntBASIC34.8■■■■□ 3.16
Acsl1P41216 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
Acsl1P41216 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.71■■■■□ 3.15
Acsl1P41216 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.65■■■■□ 3.14
Acsl1P41216 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Acsl1P41216 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Acsl1P41216 Gm27325-201ENSMUST00000175467 74 ntBASIC34.56■■■■□ 3.12
Acsl1P41216 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Acsl1P41216 Gm8109-201ENSMUST00000194076 746 ntBASIC34.53■■■■□ 3.12
Acsl1P41216 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.5■■■■□ 3.11
Acsl1P41216 Rab21-202ENSMUST00000218831 843 ntBASIC34.4■■■■□ 3.1
Acsl1P41216 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.4■■■■□ 3.1
Acsl1P41216 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Acsl1P41216 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Acsl1P41216 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
Acsl1P41216 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Acsl1P41216 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.96■■■■□ 3.03
Acsl1P41216 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Acsl1P41216 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.89■■■■□ 3.02
Acsl1P41216 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.83■■■■□ 3.01
Acsl1P41216 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Acsl1P41216 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.74■■■□□ 2.99
Acsl1P41216 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Acsl1P41216 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Acsl1P41216 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.59■■■□□ 2.97
Acsl1P41216 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.55■■■□□ 2.96
Acsl1P41216 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Acsl1P41216 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Acsl1P41216 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Acsl1P41216 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.48■■■□□ 2.95
Acsl1P41216 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Acsl1P41216 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.36■■■□□ 2.93
Acsl1P41216 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Acsl1P41216 Gm24804-201ENSMUST00000174982 85 ntBASIC33.33■■■□□ 2.93
Acsl1P41216 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.31■■■□□ 2.92
Acsl1P41216 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.28■■■□□ 2.92
Acsl1P41216 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Acsl1P41216 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Acsl1P41216 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
Acsl1P41216 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Acsl1P41216 Gm27322-201ENSMUST00000184007 104 ntBASIC32.97■■■□□ 2.87
Acsl1P41216 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.96■■■□□ 2.87
Acsl1P41216 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Acsl1P41216 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.92■■■□□ 2.86
Acsl1P41216 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.88■■■□□ 2.85
Acsl1P41216 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.87■■■□□ 2.85
Acsl1P41216 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.83■■■□□ 2.85
Acsl1P41216 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.81■■■□□ 2.84
Acsl1P41216 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.81■■■□□ 2.84
Acsl1P41216 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
Acsl1P41216 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.79■■■□□ 2.84
Acsl1P41216 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Acsl1P41216 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.76■■■□□ 2.84
Acsl1P41216 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.76■■■□□ 2.83
Acsl1P41216 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.75■■■□□ 2.83
Acsl1P41216 Zfp131-205ENSMUST00000223812 663 ntBASIC32.74■■■□□ 2.83
Acsl1P41216 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Acsl1P41216 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Acsl1P41216 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Acsl1P41216 Psd-208ENSMUST00000224556 2034 ntBASIC32.63■■■□□ 2.81
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms