Protein–RNA interactions for Protein: Q8BGI7

Lrrc39, Leucine-rich repeat-containing protein 39, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc39Q8BGI7 Gm25239-201ENSMUST00000174915 86 ntBASIC32,13■■■□□ 2,73
Lrrc39Q8BGI7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
Lrrc39Q8BGI7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Lrrc39Q8BGI7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,53■■■□□ 2,48
Lrrc39Q8BGI7 Psd-208ENSMUST00000224556 2034 ntBASIC29,49■■■□□ 2,31
Lrrc39Q8BGI7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29,32■■■□□ 2,28
Lrrc39Q8BGI7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Lrrc39Q8BGI7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Lrrc39Q8BGI7 Gm15042-201ENSMUST00000120212 883 ntBASIC28,87■■■□□ 2,21
Lrrc39Q8BGI7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,79■■■□□ 2,2
Lrrc39Q8BGI7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Lrrc39Q8BGI7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Lrrc39Q8BGI7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Lrrc39Q8BGI7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,38■■■□□ 2,13
Lrrc39Q8BGI7 Gm15045-201ENSMUST00000117359 883 ntBASIC28,35■■■□□ 2,13
Lrrc39Q8BGI7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Lrrc39Q8BGI7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,2■■■□□ 2,1
Lrrc39Q8BGI7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28,19■■■□□ 2,1
Lrrc39Q8BGI7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,96■■■□□ 2,07
Lrrc39Q8BGI7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,77■■■□□ 2,04
Lrrc39Q8BGI7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,69■■■□□ 2,02
Lrrc39Q8BGI7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,63■■■□□ 2,01
Lrrc39Q8BGI7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,62■■■□□ 2,01
Lrrc39Q8BGI7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,59■■■□□ 2,01
Lrrc39Q8BGI7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,58■■■□□ 2,01
Lrrc39Q8BGI7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,57■■■□□ 2
Lrrc39Q8BGI7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,51■■□□□ 1,99
Lrrc39Q8BGI7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,49■■□□□ 1,99
Lrrc39Q8BGI7 Gm24109-201ENSMUST00000175489 103 ntBASIC27,49■■□□□ 1,99
Lrrc39Q8BGI7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,41■■□□□ 1,98
Lrrc39Q8BGI7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27,39■■□□□ 1,97
Lrrc39Q8BGI7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,34■■□□□ 1,97
Lrrc39Q8BGI7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,27■■□□□ 1,96
Lrrc39Q8BGI7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
Lrrc39Q8BGI7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,12■■□□□ 1,93
Lrrc39Q8BGI7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,1■■□□□ 1,93
Lrrc39Q8BGI7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,08■■□□□ 1,93
Lrrc39Q8BGI7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,04■■□□□ 1,92
Lrrc39Q8BGI7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,99■■□□□ 1,91
Lrrc39Q8BGI7 Gm23366-201ENSMUST00000175022 89 ntBASIC26,98■■□□□ 1,91
Lrrc39Q8BGI7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,97■■□□□ 1,91
Lrrc39Q8BGI7 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,92■■□□□ 1,9
Lrrc39Q8BGI7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
Lrrc39Q8BGI7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,85■■□□□ 1,89
Lrrc39Q8BGI7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Lrrc39Q8BGI7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Lrrc39Q8BGI7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26,72■■□□□ 1,87
Lrrc39Q8BGI7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,7■■□□□ 1,86
Lrrc39Q8BGI7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26,49■■□□□ 1,83
Lrrc39Q8BGI7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Lrrc39Q8BGI7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26,48■■□□□ 1,83
Lrrc39Q8BGI7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Lrrc39Q8BGI7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26,28■■□□□ 1,8
Lrrc39Q8BGI7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Lrrc39Q8BGI7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Lrrc39Q8BGI7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,18■■□□□ 1,78
Lrrc39Q8BGI7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,15■■□□□ 1,78
Lrrc39Q8BGI7 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,14■■□□□ 1,77
Lrrc39Q8BGI7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Lrrc39Q8BGI7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26,09■■□□□ 1,77
Lrrc39Q8BGI7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26,08■■□□□ 1,76
Lrrc39Q8BGI7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26,01■■□□□ 1,75
Lrrc39Q8BGI7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Lrrc39Q8BGI7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Lrrc39Q8BGI7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Lrrc39Q8BGI7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,91■■□□□ 1,74
Lrrc39Q8BGI7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,89■■□□□ 1,74
Lrrc39Q8BGI7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25,88■■□□□ 1,73
Lrrc39Q8BGI7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Lrrc39Q8BGI7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25,84■■□□□ 1,73
Lrrc39Q8BGI7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25,82■■□□□ 1,72
Lrrc39Q8BGI7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Lrrc39Q8BGI7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Lrrc39Q8BGI7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Lrrc39Q8BGI7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Lrrc39Q8BGI7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Lrrc39Q8BGI7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25,58■■□□□ 1,69
Lrrc39Q8BGI7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Lrrc39Q8BGI7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Lrrc39Q8BGI7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Lrrc39Q8BGI7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Lrrc39Q8BGI7 Gm27325-201ENSMUST00000175467 74 ntBASIC25,44■■□□□ 1,66
Lrrc39Q8BGI7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Lrrc39Q8BGI7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25,37■■□□□ 1,65
Lrrc39Q8BGI7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Lrrc39Q8BGI7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Lrrc39Q8BGI7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,36■■□□□ 1,65
Lrrc39Q8BGI7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Lrrc39Q8BGI7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Lrrc39Q8BGI7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25,31■■□□□ 1,64
Lrrc39Q8BGI7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Lrrc39Q8BGI7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Lrrc39Q8BGI7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25,28■■□□□ 1,64
Lrrc39Q8BGI7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25,26■■□□□ 1,63
Lrrc39Q8BGI7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25,24■■□□□ 1,63
Lrrc39Q8BGI7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Lrrc39Q8BGI7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Lrrc39Q8BGI7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25,14■■□□□ 1,61
Lrrc39Q8BGI7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Lrrc39Q8BGI7 Gm25238-201ENSMUST00000174914 89 ntBASIC25,09■■□□□ 1,61
Retrieved 100 of 76,532 protein–RNA pairs in 22,6 ms