Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm25239-201ENSMUST00000174915 86 ntBASIC34.69■■■■□ 3.14
Ubqln1Q8R317 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ubqln1Q8R317 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Ubqln1Q8R317 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ubqln1Q8R317 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ubqln1Q8R317 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
Ubqln1Q8R317 Gm15042-201ENSMUST00000120212 883 ntBASIC30.77■■■□□ 2.52
Ubqln1Q8R317 Gm15045-201ENSMUST00000117359 883 ntBASIC30.14■■■□□ 2.42
Ubqln1Q8R317 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ubqln1Q8R317 Gm24109-201ENSMUST00000175489 103 ntBASIC29.83■■■□□ 2.37
Ubqln1Q8R317 Psd-208ENSMUST00000224556 2034 ntBASIC29.71■■■□□ 2.35
Ubqln1Q8R317 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Ubqln1Q8R317 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.42■■■□□ 2.3
Ubqln1Q8R317 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ubqln1Q8R317 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ubqln1Q8R317 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ubqln1Q8R317 Gm23366-201ENSMUST00000175022 89 ntBASIC29.07■■■□□ 2.24
Ubqln1Q8R317 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Ubqln1Q8R317 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ubqln1Q8R317 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ubqln1Q8R317 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ubqln1Q8R317 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ubqln1Q8R317 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ubqln1Q8R317 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ubqln1Q8R317 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ubqln1Q8R317 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.69■■■□□ 2.18
Ubqln1Q8R317 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ubqln1Q8R317 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ubqln1Q8R317 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ubqln1Q8R317 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ubqln1Q8R317 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ubqln1Q8R317 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.36■■■□□ 2.13
Ubqln1Q8R317 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Ubqln1Q8R317 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.25■■■□□ 2.11
Ubqln1Q8R317 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Ubqln1Q8R317 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ubqln1Q8R317 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ubqln1Q8R317 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ubqln1Q8R317 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.89■■■□□ 2.05
Ubqln1Q8R317 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ubqln1Q8R317 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ubqln1Q8R317 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.55■■■□□ 2
Ubqln1Q8R317 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Ubqln1Q8R317 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.51■■□□□ 1.99
Ubqln1Q8R317 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ubqln1Q8R317 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.49■■□□□ 1.99
Ubqln1Q8R317 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Ubqln1Q8R317 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ubqln1Q8R317 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ubqln1Q8R317 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ubqln1Q8R317 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.3■■□□□ 1.96
Ubqln1Q8R317 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ubqln1Q8R317 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ubqln1Q8R317 Gm25238-201ENSMUST00000174914 89 ntBASIC27.23■■□□□ 1.95
Ubqln1Q8R317 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubqln1Q8R317 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.22■■□□□ 1.95
Ubqln1Q8R317 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ubqln1Q8R317 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ubqln1Q8R317 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ubqln1Q8R317 Gm27325-201ENSMUST00000175467 74 ntBASIC27.06■■□□□ 1.92
Ubqln1Q8R317 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ubqln1Q8R317 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Ubqln1Q8R317 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
Ubqln1Q8R317 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Ubqln1Q8R317 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.97■■□□□ 1.91
Ubqln1Q8R317 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.96■■□□□ 1.91
Ubqln1Q8R317 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ubqln1Q8R317 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ubqln1Q8R317 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Ubqln1Q8R317 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.9■■□□□ 1.9
Ubqln1Q8R317 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.82■■□□□ 1.88
Ubqln1Q8R317 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ubqln1Q8R317 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
Ubqln1Q8R317 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ubqln1Q8R317 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ubqln1Q8R317 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ubqln1Q8R317 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.56■■□□□ 1.84
Ubqln1Q8R317 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.55■■□□□ 1.84
Ubqln1Q8R317 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ubqln1Q8R317 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.46■■□□□ 1.83
Ubqln1Q8R317 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubqln1Q8R317 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubqln1Q8R317 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubqln1Q8R317 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ubqln1Q8R317 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ubqln1Q8R317 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.39■■□□□ 1.82
Ubqln1Q8R317 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ubqln1Q8R317 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Ubqln1Q8R317 Rab21-202ENSMUST00000218831 843 ntBASIC26.28■■□□□ 1.8
Ubqln1Q8R317 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ubqln1Q8R317 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Ubqln1Q8R317 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubqln1Q8R317 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ubqln1Q8R317 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ubqln1Q8R317 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubqln1Q8R317 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubqln1Q8R317 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubqln1Q8R317 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.15■■□□□ 1.78
Ubqln1Q8R317 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubqln1Q8R317 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms