Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Gm25239-201ENSMUST00000174915 86 ntBASIC33.37■■■□□ 2.93
Pcdh12O55134 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Pcdh12O55134 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pcdh12O55134 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pcdh12O55134 Gm15042-201ENSMUST00000120212 883 ntBASIC29.37■■■□□ 2.29
Pcdh12O55134 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
Pcdh12O55134 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pcdh12O55134 Gm24109-201ENSMUST00000175489 103 ntBASIC28.81■■■□□ 2.2
Pcdh12O55134 Gm15045-201ENSMUST00000117359 883 ntBASIC28.74■■■□□ 2.19
Pcdh12O55134 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pcdh12O55134 Psd-208ENSMUST00000224556 2034 ntBASIC28.4■■■□□ 2.14
Pcdh12O55134 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pcdh12O55134 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdh12O55134 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdh12O55134 Gm23366-201ENSMUST00000175022 89 ntBASIC27.93■■■□□ 2.06
Pcdh12O55134 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pcdh12O55134 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pcdh12O55134 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Pcdh12O55134 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.57■■■□□ 2
Pcdh12O55134 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdh12O55134 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdh12O55134 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdh12O55134 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdh12O55134 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdh12O55134 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Pcdh12O55134 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdh12O55134 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdh12O55134 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdh12O55134 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdh12O55134 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdh12O55134 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdh12O55134 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.96■■□□□ 1.91
Pcdh12O55134 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.94■■□□□ 1.9
Pcdh12O55134 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdh12O55134 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdh12O55134 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdh12O55134 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.64■■□□□ 1.86
Pcdh12O55134 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdh12O55134 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.55■■□□□ 1.84
Pcdh12O55134 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
Pcdh12O55134 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdh12O55134 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Pcdh12O55134 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdh12O55134 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdh12O55134 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdh12O55134 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.27■■□□□ 1.8
Pcdh12O55134 Gm25238-201ENSMUST00000174914 89 ntBASIC26.26■■□□□ 1.79
Pcdh12O55134 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdh12O55134 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdh12O55134 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.09■■□□□ 1.77
Pcdh12O55134 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdh12O55134 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdh12O55134 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdh12O55134 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdh12O55134 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdh12O55134 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.85■■□□□ 1.73
Pcdh12O55134 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdh12O55134 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
Pcdh12O55134 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.79■■□□□ 1.72
Pcdh12O55134 Gm27325-201ENSMUST00000175467 74 ntBASIC25.78■■□□□ 1.72
Pcdh12O55134 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.66■■□□□ 1.7
Pcdh12O55134 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdh12O55134 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdh12O55134 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.56■■□□□ 1.68
Pcdh12O55134 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.54■■□□□ 1.68
Pcdh12O55134 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh12O55134 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.54■■□□□ 1.68
Pcdh12O55134 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh12O55134 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdh12O55134 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.47■■□□□ 1.67
Pcdh12O55134 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
Pcdh12O55134 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdh12O55134 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Pcdh12O55134 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdh12O55134 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.38■■□□□ 1.65
Pcdh12O55134 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh12O55134 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh12O55134 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdh12O55134 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdh12O55134 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdh12O55134 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Pcdh12O55134 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdh12O55134 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdh12O55134 Rab21-202ENSMUST00000218831 843 ntBASIC25.2■■□□□ 1.62
Pcdh12O55134 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdh12O55134 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.14■■□□□ 1.62
Pcdh12O55134 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcdh12O55134 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdh12O55134 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.09■■□□□ 1.61
Pcdh12O55134 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdh12O55134 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdh12O55134 Gm25262-201ENSMUST00000174934 133 ntBASIC25.08■■□□□ 1.61
Pcdh12O55134 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdh12O55134 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Pcdh12O55134 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdh12O55134 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh12O55134 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh12O55134 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Pcdh12O55134 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Pcdh12O55134 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms