Protein–RNA interactions for Protein: Q3V3N7

Bbs1, Bardet-Biedl syndrome 1 protein homolog, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbs1Q3V3N7 Gm25239-201ENSMUST00000174915 86 ntBASIC31.82■■■□□ 2.68
Bbs1Q3V3N7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Bbs1Q3V3N7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Bbs1Q3V3N7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Bbs1Q3V3N7 Psd-208ENSMUST00000224556 2034 ntBASIC29.28■■■□□ 2.28
Bbs1Q3V3N7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Bbs1Q3V3N7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Bbs1Q3V3N7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Bbs1Q3V3N7 Gm15042-201ENSMUST00000120212 883 ntBASIC28.56■■■□□ 2.16
Bbs1Q3V3N7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Bbs1Q3V3N7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Bbs1Q3V3N7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Bbs1Q3V3N7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.12■■■□□ 2.09
Bbs1Q3V3N7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Bbs1Q3V3N7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Bbs1Q3V3N7 Gm15045-201ENSMUST00000117359 883 ntBASIC28.08■■■□□ 2.09
Bbs1Q3V3N7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Bbs1Q3V3N7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Bbs1Q3V3N7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Bbs1Q3V3N7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Bbs1Q3V3N7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Bbs1Q3V3N7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Bbs1Q3V3N7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Bbs1Q3V3N7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Bbs1Q3V3N7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Bbs1Q3V3N7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.32■■□□□ 1.96
Bbs1Q3V3N7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Bbs1Q3V3N7 Gm24109-201ENSMUST00000175489 103 ntBASIC27.26■■□□□ 1.95
Bbs1Q3V3N7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Bbs1Q3V3N7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Bbs1Q3V3N7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Bbs1Q3V3N7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.13■■□□□ 1.93
Bbs1Q3V3N7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Bbs1Q3V3N7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Bbs1Q3V3N7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Bbs1Q3V3N7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Bbs1Q3V3N7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Bbs1Q3V3N7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.82■■□□□ 1.88
Bbs1Q3V3N7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Bbs1Q3V3N7 Gm23366-201ENSMUST00000175022 89 ntBASIC26.68■■□□□ 1.86
Bbs1Q3V3N7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.66■■□□□ 1.86
Bbs1Q3V3N7 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.64■■□□□ 1.86
Bbs1Q3V3N7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Bbs1Q3V3N7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Bbs1Q3V3N7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Bbs1Q3V3N7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Bbs1Q3V3N7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Bbs1Q3V3N7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Bbs1Q3V3N7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Bbs1Q3V3N7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Bbs1Q3V3N7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.2■■□□□ 1.78
Bbs1Q3V3N7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.17■■□□□ 1.78
Bbs1Q3V3N7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Bbs1Q3V3N7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Bbs1Q3V3N7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Bbs1Q3V3N7 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.96■■□□□ 1.75
Bbs1Q3V3N7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Bbs1Q3V3N7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.94■■□□□ 1.74
Bbs1Q3V3N7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Bbs1Q3V3N7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Bbs1Q3V3N7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Bbs1Q3V3N7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Bbs1Q3V3N7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Bbs1Q3V3N7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Bbs1Q3V3N7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Bbs1Q3V3N7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Bbs1Q3V3N7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Bbs1Q3V3N7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Bbs1Q3V3N7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
Bbs1Q3V3N7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Bbs1Q3V3N7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Bbs1Q3V3N7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
Bbs1Q3V3N7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Bbs1Q3V3N7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Bbs1Q3V3N7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Bbs1Q3V3N7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Bbs1Q3V3N7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Bbs1Q3V3N7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Bbs1Q3V3N7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Bbs1Q3V3N7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Bbs1Q3V3N7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.32■■□□□ 1.64
Bbs1Q3V3N7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Bbs1Q3V3N7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Bbs1Q3V3N7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Bbs1Q3V3N7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Bbs1Q3V3N7 Gm27325-201ENSMUST00000175467 74 ntBASIC25.18■■□□□ 1.62
Bbs1Q3V3N7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Bbs1Q3V3N7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Bbs1Q3V3N7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Bbs1Q3V3N7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Bbs1Q3V3N7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Bbs1Q3V3N7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.11■■□□□ 1.61
Bbs1Q3V3N7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Bbs1Q3V3N7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Bbs1Q3V3N7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Bbs1Q3V3N7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Bbs1Q3V3N7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Bbs1Q3V3N7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Bbs1Q3V3N7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Bbs1Q3V3N7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms