Protein–RNA interactions for Protein: Q3V3N7

Bbs1, Bardet-Biedl syndrome 1 protein homolog, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbs1Q3V3N7 Gm25239-201ENSMUST00000174915 86 ntBASIC31.82■■■□□ 2.68
Bbs1Q3V3N7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Bbs1Q3V3N7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Bbs1Q3V3N7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Bbs1Q3V3N7 Psd-208ENSMUST00000224556 2034 ntBASIC29.28■■■□□ 2.28
Bbs1Q3V3N7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Bbs1Q3V3N7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Bbs1Q3V3N7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Bbs1Q3V3N7 Gm15042-201ENSMUST00000120212 883 ntBASIC28.56■■■□□ 2.16
Bbs1Q3V3N7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Bbs1Q3V3N7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Bbs1Q3V3N7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Bbs1Q3V3N7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.12■■■□□ 2.09
Bbs1Q3V3N7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Bbs1Q3V3N7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Bbs1Q3V3N7 Gm15045-201ENSMUST00000117359 883 ntBASIC28.08■■■□□ 2.09
Bbs1Q3V3N7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Bbs1Q3V3N7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Bbs1Q3V3N7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Bbs1Q3V3N7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Bbs1Q3V3N7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Bbs1Q3V3N7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Bbs1Q3V3N7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Bbs1Q3V3N7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Bbs1Q3V3N7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Bbs1Q3V3N7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.32■■□□□ 1.96
Bbs1Q3V3N7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Bbs1Q3V3N7 Gm24109-201ENSMUST00000175489 103 ntBASIC27.26■■□□□ 1.95
Bbs1Q3V3N7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Bbs1Q3V3N7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Bbs1Q3V3N7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Bbs1Q3V3N7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.13■■□□□ 1.93
Bbs1Q3V3N7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Bbs1Q3V3N7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Bbs1Q3V3N7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Bbs1Q3V3N7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Bbs1Q3V3N7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Bbs1Q3V3N7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.82■■□□□ 1.88
Bbs1Q3V3N7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Bbs1Q3V3N7 Gm23366-201ENSMUST00000175022 89 ntBASIC26.68■■□□□ 1.86
Bbs1Q3V3N7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.66■■□□□ 1.86
Bbs1Q3V3N7 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.64■■□□□ 1.86
Bbs1Q3V3N7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Bbs1Q3V3N7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Bbs1Q3V3N7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Bbs1Q3V3N7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Bbs1Q3V3N7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Bbs1Q3V3N7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Bbs1Q3V3N7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Bbs1Q3V3N7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Bbs1Q3V3N7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.2■■□□□ 1.78
Bbs1Q3V3N7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.17■■□□□ 1.78
Bbs1Q3V3N7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Bbs1Q3V3N7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Bbs1Q3V3N7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Bbs1Q3V3N7 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.96■■□□□ 1.75
Bbs1Q3V3N7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Bbs1Q3V3N7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.94■■□□□ 1.74
Bbs1Q3V3N7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Bbs1Q3V3N7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Bbs1Q3V3N7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Bbs1Q3V3N7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Bbs1Q3V3N7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Bbs1Q3V3N7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Bbs1Q3V3N7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Bbs1Q3V3N7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Bbs1Q3V3N7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Bbs1Q3V3N7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Bbs1Q3V3N7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
Bbs1Q3V3N7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Bbs1Q3V3N7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Bbs1Q3V3N7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
Bbs1Q3V3N7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Bbs1Q3V3N7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Bbs1Q3V3N7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Bbs1Q3V3N7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Bbs1Q3V3N7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Bbs1Q3V3N7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Bbs1Q3V3N7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Bbs1Q3V3N7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Bbs1Q3V3N7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.32■■□□□ 1.64
Bbs1Q3V3N7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Bbs1Q3V3N7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Bbs1Q3V3N7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Bbs1Q3V3N7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Bbs1Q3V3N7 Gm27325-201ENSMUST00000175467 74 ntBASIC25.18■■□□□ 1.62
Bbs1Q3V3N7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Bbs1Q3V3N7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Bbs1Q3V3N7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Bbs1Q3V3N7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Bbs1Q3V3N7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Bbs1Q3V3N7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.11■■□□□ 1.61
Bbs1Q3V3N7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Bbs1Q3V3N7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Bbs1Q3V3N7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Bbs1Q3V3N7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Bbs1Q3V3N7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Bbs1Q3V3N7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Bbs1Q3V3N7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Bbs1Q3V3N7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms