RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Cdh11P55288 796 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cpne2P59108 548 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 SeboxP70368 190 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fabp5Q05816 135 aaKnown RBP9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Spata6Q3U6K5 488 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 UnklQ5FWH2 727 aaKnown RBP9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rnase12Q5GAM8 145 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fzd4Q61088 537 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 E2f1Q61501 430 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tlx2Q61663 284 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Onecut2Q6XBJ3 505 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr1225Q7TR01 311 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr1219Q7TR04 311 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zdhhc19Q810M5 347 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 MylipQ8BM54 445 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ap3s2Q8BSZ2 193 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Pdcd2lQ8C5N5 364 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 TifabQ8JZM6 147 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Hus1bQ8K572 276 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Q8R2K8 148 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 GcaQ8VC88 220 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ms4a6bQ99N09 244 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rnaseh2cQ9CQ18 166 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Cml5Q9QXS8 227 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Hs6st3Q9QYK4 470 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 NcdnQ9Z0E0 729 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gdf11Q9Z1W4 405 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Shroom3Q9QXN0 1986 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sbf1Q6ZPE2 1867 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 KantrA0A1W2P7I0 76 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Arxes1C0HK79 180 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Arxes2C0HK80 180 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vmn2r34E9PVI0 852 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Adh6aE9Q5Z6 375 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Gm4181E9Q7X3 184 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vmn2r37F8VQD3 802 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vmn2r45L7N2B5 852 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vmn2r29L7N2D4 852 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mcpt9O35164 246 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ccrl2O35457 360 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sdc4O35988 198 aaKnown RBP9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Stc1O55183 247 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Brd7O88665 651 aaKnown RBP9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ctbp1O88712 441 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 CtsbP10605 339 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Clec3bP43025 202 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 CratP47934 626 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Lsm6P62313 80 aaKnown RBP9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Nrsn1P97799 196 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Anxa7Q07076 463 aaKnown RBP9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fam198aQ3UY90 562 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Fam71f1Q3UZD7 341 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 C1ql4Q4ZJM9 238 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Six4Q61321 775 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 AktipQ64362 292 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Timd4Q6U7R4 343 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Casd1Q7TN73 797 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr1509Q7TQQ0 308 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Acsm4Q80W40 580 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Slc38a9Q8BGD6 560 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Zc3h12dQ8BIY3 533 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rrnad1Q8BZG5 475 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 RfkQ8CFV9 155 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sdr9c7Q8K3P0 313 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Q8R3Y5 413 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Olfr214Q8VG27 320 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Wdr13Q91V09 485 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Aco2Q99KI0 780 aaKnown RBP9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Pramel1Q99MW3 458 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tmem216Q9CQC4 141 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Rab5aQ9CQD1 215 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Wdsub1Q9D0I6 474 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Q9D9C7 252 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sun5Q9DA32 373 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Ssna1Q9JJ94 119 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Isg20Q9JL16 300 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Sec61a2Q9JLR1 476 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 GnmtQ9QXF8 293 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Mapk9Q9WTU6 423 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Phf1Q9Z1B8 559 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Vamp5Q9Z2P8 102 aa9.09□□□□□ -0.95
Hmgb1-201ENSMUST00000085546 Tcrg-V5A0A0G2JGV5 113 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gm5678A0A1B0GRG8 277 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr1124A2AT86 318 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Esp15A8R0U8 85 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gm8180E9PXN0 145 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gm20390E9PZF0 267 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Vmn1r129E9QA94 307 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gm8720K9J7F4 307 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Slc10a1O08705 362 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Cd160O88875 185 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Apba3O88888 571 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Scg5P12961 212 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Flt3lgP49772 232 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Adamts8P57110 905 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Zcwpw2Q08EN7 125 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ubxn2bQ0KL01 331 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Rhox4dQ2MDG0 205 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Entpd7Q3TCT4 606 aa9.09□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Shisa3Q3UPR0 238 aa9.09□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms