RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Stmn3O70166 180 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 P03976 113 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Evx2P49749 475 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Nkx3-2P97503 333 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Ccdc106Q3ULM0 279 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Bcl2a1bQ497M6 172 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 PfplQ5RKV8 702 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Marveld1Q7TQJ1 173 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Cox15Q8BJ03 413 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 H2afy2Q8CCK0 372 aaKnown RBP17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Rnf222Q8CEF8 211 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Rab38Q8QZZ8 211 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 PnpoQ91XF0 261 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Fam118aQ91YN1 357 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 4931417E11RikQ9CR05 305 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Otud1Q9CUB6 454 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 2410137M14RikQ9CWF0 162 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 NaxdQ9CZ42 343 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Raet1eQ9CZQ6 251 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Snapc3Q9D2C9 407 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Cmpk1Q9DBP5 196 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Plxnd1Q3UH93 1925 aa17.05■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Gm266A6H634 200 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Gm3755K7N743 167 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 B3galt2O54905 422 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Gstm5P48774 224 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Cep76Q0VEJ0 659 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Msto1Q2YDW2 556 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Treml4Q3LRV9 263 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Foxred1Q3TQB2 487 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Nhlrc4Q3UP44 136 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Macrod2Q3UYG8 475 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Bbs1Q3V3N7 593 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Tas2r135Q7TQA9 312 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Pum2Q80U58 1066 aaKnown RBP17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Slc25a45Q8CFJ7 288 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Sphk1Q8CI15 382 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Coq9Q8K1Z0 313 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Anapc10Q8K2H6 185 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Grhl2Q8K5C0 625 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Hbp1Q8R316 516 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Olfr1312Q8VF10 317 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Sntg1Q925E1 517 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Rnf186Q9D241 226 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Nr4a3Q9QZB6 627 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Gm4779A0A1B0GR91 561 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 A0A286YDM2 672 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Ttc39aA2ACP1 578 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Gm17728E9Q5K2 132 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Olfr730E9Q8M3 318 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Apoc3P33622 99 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Tbx6P70327 436 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Bpifa1P97361 278 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Kcnk6Q3TBV4 313 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Ankrd37Q569N2 159 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Dsg1cQ7TSF0 911 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Fbxl8Q8CIG9 374 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Klhl25Q8R2P1 589 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Olfr1491Q8VEZ5 319 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 D6Wsu163eQ91YN0 552 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Krt88Q9CPR6 171 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Igkv12-38A0A0G2JEI7 115 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 TomtA1Y9I9 258 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 R3hdmlA2A5I3 253 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 AgmatA2AS89 358 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 MfngO09008 321 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Prl4a1O35256 227 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Cdh11P55288 796 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Slc30a1Q60738 503 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Ap5m1Q8BJ63 490 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Shisa7Q8C3Q5 558 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 SinhcafQ8C8M1 221 aaKnown RBP17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 MepceQ8K3A9 666 aaKnown RBP17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Swi5Q8K3D3 89 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Gipc3Q8R5M0 297 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Olfr781Q8VFZ8 311 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Rwdd2bQ99M03 290 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Rprd1bQ9CSU0 326 aaKnown RBP17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Arfgap1Q9EPJ9 414 aa17.04■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Fer1l5P0DM40 2038 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Btbd2E9PUS2 523 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Gm1110F6Y113 635 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Spsb2O88838 264 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Gna13P27601 377 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Slc12a3P59158 1002 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Rps7P62082 194 aaKnown RBP17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Trpc5osQ3UHV4 110 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Sema4cQ64151 834 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Lrrc39Q8BGI7 337 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Lrp11Q8CB67 483 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 AspaQ8R3P0 312 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Tmem185bQ8R3R5 350 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 TipinQ91WA1 278 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Sucnr1Q99MT6 317 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Tspan31Q9CQ88 210 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Jph3Q9ET77 744 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Phf3B2RQG2 2025 aaKnown RBP17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Trbv2A0A0B4J1G8 114 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 Ppt2O35448 302 aa17.03■□□□□ 0.32
Ccdc3-201ENSMUST00000027988 RaxO35602 342 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms