Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Gm25239-201ENSMUST00000174915 86 ntBASIC38.08■■■■□ 3.69
Hbp1Q8R316 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Hbp1Q8R316 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Hbp1Q8R316 Gm15042-201ENSMUST00000120212 883 ntBASIC33.4■■■□□ 2.94
Hbp1Q8R316 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Hbp1Q8R316 Gm24109-201ENSMUST00000175489 103 ntBASIC32.92■■■□□ 2.86
Hbp1Q8R316 Gm15045-201ENSMUST00000117359 883 ntBASIC32.63■■■□□ 2.81
Hbp1Q8R316 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hbp1Q8R316 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Hbp1Q8R316 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Hbp1Q8R316 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Hbp1Q8R316 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Hbp1Q8R316 Gm23366-201ENSMUST00000175022 89 ntBASIC31.88■■■□□ 2.69
Hbp1Q8R316 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Hbp1Q8R316 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Hbp1Q8R316 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Hbp1Q8R316 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.02■■■□□ 2.56
Hbp1Q8R316 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Hbp1Q8R316 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Hbp1Q8R316 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Hbp1Q8R316 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.67■■■□□ 2.5
Hbp1Q8R316 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Hbp1Q8R316 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Hbp1Q8R316 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hbp1Q8R316 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hbp1Q8R316 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.46■■■□□ 2.47
Hbp1Q8R316 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hbp1Q8R316 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.37■■■□□ 2.45
Hbp1Q8R316 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.37■■■□□ 2.45
Hbp1Q8R316 Psd-208ENSMUST00000224556 2034 ntBASIC30.37■■■□□ 2.45
Hbp1Q8R316 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Hbp1Q8R316 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Hbp1Q8R316 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Hbp1Q8R316 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Hbp1Q8R316 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.08■■■□□ 2.41
Hbp1Q8R316 Gm25238-201ENSMUST00000174914 89 ntBASIC30.01■■■□□ 2.39
Hbp1Q8R316 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.87■■■□□ 2.37
Hbp1Q8R316 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Hbp1Q8R316 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Hbp1Q8R316 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Hbp1Q8R316 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Hbp1Q8R316 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Hbp1Q8R316 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
Hbp1Q8R316 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.41■■■□□ 2.3
Hbp1Q8R316 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.36■■■□□ 2.29
Hbp1Q8R316 Gm27325-201ENSMUST00000175467 74 ntBASIC29.29■■■□□ 2.28
Hbp1Q8R316 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Hbp1Q8R316 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Hbp1Q8R316 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.21■■■□□ 2.27
Hbp1Q8R316 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Hbp1Q8R316 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
Hbp1Q8R316 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.07■■■□□ 2.24
Hbp1Q8R316 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Hbp1Q8R316 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Hbp1Q8R316 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29■■■□□ 2.23
Hbp1Q8R316 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.94■■■□□ 2.22
Hbp1Q8R316 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Hbp1Q8R316 Gm25262-201ENSMUST00000174934 133 ntBASIC28.78■■■□□ 2.2
Hbp1Q8R316 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Hbp1Q8R316 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Hbp1Q8R316 Rab21-202ENSMUST00000218831 843 ntBASIC28.72■■■□□ 2.19
Hbp1Q8R316 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
Hbp1Q8R316 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Hbp1Q8R316 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Hbp1Q8R316 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Hbp1Q8R316 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Hbp1Q8R316 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.62■■■□□ 2.17
Hbp1Q8R316 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Hbp1Q8R316 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Hbp1Q8R316 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Hbp1Q8R316 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Hbp1Q8R316 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.55■■■□□ 2.16
Hbp1Q8R316 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.48■■■□□ 2.15
Hbp1Q8R316 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Hbp1Q8R316 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Hbp1Q8R316 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Hbp1Q8R316 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Hbp1Q8R316 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Hbp1Q8R316 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Hbp1Q8R316 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Hbp1Q8R316 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.33■■■□□ 2.13
Hbp1Q8R316 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Hbp1Q8R316 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.24■■■□□ 2.11
Hbp1Q8R316 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Hbp1Q8R316 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.21■■■□□ 2.11
Hbp1Q8R316 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.17■■■□□ 2.1
Hbp1Q8R316 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.13■■■□□ 2.09
Hbp1Q8R316 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Hbp1Q8R316 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Hbp1Q8R316 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Hbp1Q8R316 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.09■■■□□ 2.09
Hbp1Q8R316 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Hbp1Q8R316 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Hbp1Q8R316 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Hbp1Q8R316 Gm26115-201ENSMUST00000175605 87 ntBASIC28.02■■■□□ 2.08
Hbp1Q8R316 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Hbp1Q8R316 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Hbp1Q8R316 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.96■■■□□ 2.07
Hbp1Q8R316 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Hbp1Q8R316 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.93■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms