Protein–RNA interactions for Protein: Q3TQB2

Foxred1, FAD-dependent oxidoreductase domain-containing protein 1, mousemouse

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxred1Q3TQB2 Gm25239-201ENSMUST00000174915 86 ntBASIC35.88■■■■□ 3.33
Foxred1Q3TQB2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Foxred1Q3TQB2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Foxred1Q3TQB2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Foxred1Q3TQB2 Gm15042-201ENSMUST00000120212 883 ntBASIC31.55■■■□□ 2.64
Foxred1Q3TQB2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Foxred1Q3TQB2 Gm24109-201ENSMUST00000175489 103 ntBASIC31■■■□□ 2.55
Foxred1Q3TQB2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Foxred1Q3TQB2 Gm15045-201ENSMUST00000117359 883 ntBASIC30.9■■■□□ 2.54
Foxred1Q3TQB2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Foxred1Q3TQB2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Foxred1Q3TQB2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Foxred1Q3TQB2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Foxred1Q3TQB2 Gm23366-201ENSMUST00000175022 89 ntBASIC29.97■■■□□ 2.39
Foxred1Q3TQB2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Foxred1Q3TQB2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.7■■■□□ 2.34
Foxred1Q3TQB2 Psd-208ENSMUST00000224556 2034 ntBASIC29.57■■■□□ 2.32
Foxred1Q3TQB2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Foxred1Q3TQB2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Foxred1Q3TQB2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Foxred1Q3TQB2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Foxred1Q3TQB2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Foxred1Q3TQB2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Foxred1Q3TQB2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
Foxred1Q3TQB2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Foxred1Q3TQB2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Foxred1Q3TQB2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.97■■■□□ 2.23
Foxred1Q3TQB2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.97■■■□□ 2.23
Foxred1Q3TQB2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Foxred1Q3TQB2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.72■■■□□ 2.19
Foxred1Q3TQB2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Foxred1Q3TQB2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Foxred1Q3TQB2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.54■■■□□ 2.16
Foxred1Q3TQB2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.48■■■□□ 2.15
Foxred1Q3TQB2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Foxred1Q3TQB2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Foxred1Q3TQB2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Foxred1Q3TQB2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Foxred1Q3TQB2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Foxred1Q3TQB2 Gm25238-201ENSMUST00000174914 89 ntBASIC28.26■■■□□ 2.11
Foxred1Q3TQB2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.18■■■□□ 2.1
Foxred1Q3TQB2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Foxred1Q3TQB2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Foxred1Q3TQB2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.99■■■□□ 2.07
Foxred1Q3TQB2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Foxred1Q3TQB2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Foxred1Q3TQB2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Foxred1Q3TQB2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Foxred1Q3TQB2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Foxred1Q3TQB2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.84■■■□□ 2.05
Foxred1Q3TQB2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Foxred1Q3TQB2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Foxred1Q3TQB2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.69■■■□□ 2.02
Foxred1Q3TQB2 Gm27325-201ENSMUST00000175467 74 ntBASIC27.68■■■□□ 2.02
Foxred1Q3TQB2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
Foxred1Q3TQB2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Foxred1Q3TQB2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Foxred1Q3TQB2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Foxred1Q3TQB2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.45■■□□□ 1.99
Foxred1Q3TQB2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Foxred1Q3TQB2 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.44■■□□□ 1.98
Foxred1Q3TQB2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.36■■□□□ 1.97
Foxred1Q3TQB2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Foxred1Q3TQB2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
Foxred1Q3TQB2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Foxred1Q3TQB2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.32■■□□□ 1.96
Foxred1Q3TQB2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Foxred1Q3TQB2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Foxred1Q3TQB2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Foxred1Q3TQB2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Foxred1Q3TQB2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
Foxred1Q3TQB2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Foxred1Q3TQB2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Foxred1Q3TQB2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.1■■□□□ 1.93
Foxred1Q3TQB2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Foxred1Q3TQB2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Foxred1Q3TQB2 Rab21-202ENSMUST00000218831 843 ntBASIC27.04■■□□□ 1.92
Foxred1Q3TQB2 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.03■■□□□ 1.92
Foxred1Q3TQB2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Foxred1Q3TQB2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.97■■□□□ 1.91
Foxred1Q3TQB2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Foxred1Q3TQB2 Gm25262-201ENSMUST00000174934 133 ntBASIC26.93■■□□□ 1.9
Foxred1Q3TQB2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Foxred1Q3TQB2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.92■■□□□ 1.9
Foxred1Q3TQB2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Foxred1Q3TQB2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Foxred1Q3TQB2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Foxred1Q3TQB2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Foxred1Q3TQB2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Foxred1Q3TQB2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.71■■□□□ 1.87
Foxred1Q3TQB2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Foxred1Q3TQB2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Foxred1Q3TQB2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.67■■□□□ 1.86
Foxred1Q3TQB2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Foxred1Q3TQB2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Foxred1Q3TQB2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Foxred1Q3TQB2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Foxred1Q3TQB2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Foxred1Q3TQB2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Foxred1Q3TQB2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms