RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 LIPGQ9Y5X9 500 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 ENPP4Q9Y6X5 453 aa12.89□□□□□ -0.35
SSBP1-201ENST00000265304 A0A1B0GWA3 101 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 FAM47E-STBD1D6RA91 191 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 M0R3H8 397 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 FFAR1O14842 300 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 ADAMDEC1O15204 470 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 TRAPPC6AO75865 159 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 CYP7B1O75881 506 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 OR5F1O95221 314 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF682O95780 498 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 IGF2P01344 180 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 THY1P04216 161 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 IFNW1P05000 195 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 GPIP06744 558 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 PEPDP12955 493 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF708P17019 499 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 BMP7P18075 431 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 RYKP34925 604 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 OR1E2P47887 323 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 LHX2P50458 406 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 POLR2HP52434 150 aaKnown RBP12.88□□□□□ -0.35
SSBP1-201ENST00000265304 MLLT10P55197 1068 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 CLDN15P56746 228 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 CLDN18P56856 261 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 ACTR3P61158 418 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 COPZ1P61923 177 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 OR1Q1Q15612 314 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.88□□□□□ -0.35
SSBP1-201ENST00000265304 CYP2R1Q6VVX0 501 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 ADGRE4PQ86SQ3 457 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 ADGRG5Q8IZF4 528 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 TMCO5AQ8N6Q1 288 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 OR10Q1Q8NGQ4 319 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 OR14L1PQ8NHC6 308 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 TPD52L3Q96J77 140 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 MPP4Q96JB8 637 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF300Q96RE9 604 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-201ENST00000265304 UCN2Q96RP3 112 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 MCHR1Q99705 422 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 TIMP4Q99727 224 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 UGT2B28Q9BY64 529 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 SLC6A15Q9H2J7 730 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 TMEM27Q9HBJ8 222 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 VDAC3Q9Y277 283 aa12.88□□□□□ -0.35
SSBP1-201ENST00000265304 USP9XQ93008 2570 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-201ENST00000265304 A0A087WUJ7 227 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 TRAPPC13A5PLN9 417 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 BCKDKO14874 412 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 NUDT14O95848 222 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 PNMTP11086 282 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 NQO1P15559 274 aaKnown RBP12.87□□□□□ -0.35
SSBP1-201ENST00000265304 RHCEP18577 417 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 TNFRSF1BP20333 461 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 TACR3P29371 465 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 CCR4P51679 360 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 HMGA2P52926 109 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 VLDLRP98155 873 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 HOXC5Q00444 222 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 FOXF1Q12946 379 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 SELENBP1Q13228 472 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 COLEC12Q5KU26 742 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 ENTPD8Q5MY95 495 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF605Q86T29 641 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 GGNQ86UU5 652 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 GALNT11Q8NCW6 608 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 PIK3C3Q8NEB9 887 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 ZNF563Q8TA94 476 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 ADAMTS16Q8TE57 1224 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 SLC25A43Q8WUT9 341 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-201ENST00000265304 ABTB1Q969K4 478 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-201ENST00000265304 SARAFQ96BY9 339 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 SLC47A1Q96FL8 570 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 WDYHV1Q96HA8 205 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 ADGRG7Q96K78 797 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 SFXN2Q96NB2 322 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 PRSS27Q9BQR3 290 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 POTEKPQ9BYX7 375 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 ANKRD19PQ9H560 264 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 CCM2LQ9NUG4 571 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-201ENST00000265304 STOML1Q9UBI4 398 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 CHRNA9Q9UGM1 479 aa12.87□□□□□ -0.35
SSBP1-201ENST00000265304 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-201ENST00000265304 NCOA6Q14686 2063 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-201ENST00000265304 A0A1B0GTH9 108 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 HTR3EA5X5Y0 456 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 CHP2O43745 196 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 STAMBPO95630 424 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 HOXD4P09016 255 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-201ENST00000265304 ITGA2P17301 1181 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 GCKP35557 465 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 CDH12P55289 794 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 MERTKQ12866 999 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 CCNIQ14094 377 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 CTU2Q2VPK5 515 aaKnown RBP12.86□□□□□ -0.35
SSBP1-201ENST00000265304 EMC4Q5J8M3 183 aa12.86□□□□□ -0.35
SSBP1-201ENST00000265304 C5orf46Q6UWT4 87 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms