RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 STX16-NPEPL1H3BU86 382 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 STX16O14662 325 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 OIP5O43482 229 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 OR4F21O95013 312 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 NKX2-2O95096 273 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 RPS17P08708 135 aaKnown RBP9.16□□□□□ -0.94
CLDND1-231ENST00000515620 HSD3B1P14060 373 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 DAOP14920 347 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 DDCP20711 480 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 HSD3B2P26439 372 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 GIFP27352 417 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 SERPINF1P36955 418 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 CDH13P55290 713 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 FOXG1P55316 489 aaPredicted RBP9.16□□□□□ -0.94
CLDND1-231ENST00000515620 SELENBP1Q13228 472 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 TRADDQ15628 312 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 TRIP10Q15642 601 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 TOMM34Q15785 309 aaPredicted RBP9.16□□□□□ -0.94
CLDND1-231ENST00000515620 PDCD2Q16342 344 aaPredicted RBP9.16□□□□□ -0.94
CLDND1-231ENST00000515620 GABRA6Q16445 453 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 VPS26BQ4G0F5 336 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 SPIN4Q56A73 249 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 C9orf135Q5VTT2 229 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 CYS1Q717R9 158 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 GLCCI1Q86VQ1 547 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 SVOPLQ8N434 492 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 WDR31Q8NA23 367 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 PHOSPHO1Q8TCT1 267 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 MRRFQ96E11 262 aaKnown RBP9.16□□□□□ -0.94
CLDND1-231ENST00000515620 APIPQ96GX9 242 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 AMDHD1Q96NU7 426 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 OR5B2Q96R09 309 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 UBQLN4Q9NRR5 601 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 EMC3Q9P0I2 261 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 ZNF225Q9UK10 706 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 SNX12Q9UMY4 172 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 SNX24Q9Y343 169 aa9.16□□□□□ -0.94
CLDND1-231ENST00000515620 GPC6Q9Y625 555 aaPredicted RBP9.16□□□□□ -0.94
CLDND1-231ENST00000515620 A0A1W2PQD3 144 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 SMIM24O75264 130 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 KCNK2O95069 426 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 H6PDO95479 791 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 KRT6AP02538 564 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 KRT6BP04259 564 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 ITGA5P08648 1049 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 ANXA4P09525 319 aaPredicted RBP9.15□□□□□ -0.94
CLDND1-231ENST00000515620 ACP2P11117 423 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 PRKCAP17252 672 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 PGCP20142 388 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 EPHA1P21709 976 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 KRT6CP48668 564 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 HTR6P50406 440 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 BTKQ06187 659 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 ZNF763Q0D2J5 394 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 C2orf80Q0P641 193 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 HSPB3Q12988 150 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 NDUFAF6Q330K2 333 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 CCNJQ5T5M9 372 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 OR7E24Q6IFN5 339 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 CBLN3Q6UW01 205 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 SHISA2Q6UWI4 295 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 TREML4Q6UXN2 200 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 SZRD1Q7Z422 152 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 SLC35F6Q8N357 371 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 OR6Y1Q8NGX8 325 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 FBF1Q8TES7 1133 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 ZNF483Q8TF39 744 aaPredicted RBP9.15□□□□□ -0.94
CLDND1-231ENST00000515620 OTUB1Q96FW1 271 aaPredicted RBP9.15□□□□□ -0.94
CLDND1-231ENST00000515620 MUS81Q96NY9 551 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 ZNF747Q9BV97 191 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 SAP130Q9H0E3 1048 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 RAB1BQ9H0U4 201 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 VPS11Q9H270 941 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 LPAR2Q9HBW0 351 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 MALT1Q9UDY8 824 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 GRID1Q9ULK0 1009 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 TMCO1Q9UM00 188 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 USP22Q9UPT9 525 aa9.15□□□□□ -0.94
CLDND1-231ENST00000515620 NOSIPQ9Y314 301 aaKnown RBP9.15□□□□□ -0.94
CLDND1-231ENST00000515620 HMX2A2RU54 273 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 B4DSR2 109 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 B9A039 149 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 EIF3HO15372 352 aaKnown RBP eCLIP9.14□□□□□ -0.95
CLDND1-231ENST00000515620 GSTA2P09210 222 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 OR4A8P0C604 315 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 PRPS2P11908 318 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 TYK2P29597 1187 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 STX2P32856 288 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 MAP3K8P41279 467 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 LIMS1P48059 325 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 PPOXP50336 477 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 IDH3GP51553 393 aaPredicted RBP9.14□□□□□ -0.95
CLDND1-231ENST00000515620 ARFIP2P53365 341 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 PRKAG1P54619 331 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 SUMO3P55854 103 aaPredicted RBP9.14□□□□□ -0.95
CLDND1-231ENST00000515620 NAB1Q13506 487 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 ADIPOQQ15848 244 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 DUSP5Q16690 384 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 ABLIM2Q6H8Q1 611 aa9.14□□□□□ -0.95
CLDND1-231ENST00000515620 C3orf33Q6P1S2 294 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms