RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF724A8MTY0 619 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 NPIPA7E9PJI5 369 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 EIF3HO15372 352 aaKnown RBP eCLIP13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 EFNA2O43921 213 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 NPIPA8P0DM63 369 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 APEX1P27695 318 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 SLC7A1P30825 629 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 RAC3P60763 192 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 SNRPD2P62316 118 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 RAE1P78406 368 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 SCGB2A2Q13296 93 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 MLC1Q15049 377 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 SPIN4Q56A73 249 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 FBXW9Q5XUX1 488 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 LETMD1Q6P1Q0 360 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 UGT2A3Q6UWM9 527 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 DEF8Q6ZN54 512 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 GALNT5Q7Z7M9 940 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 UBE2J2Q8N2K1 259 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 FBXO27Q8NI29 283 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 ZNF418Q8TF45 676 aaPredicted RBP13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 FAM216AQ8WUB2 273 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 HPS1Q92902 700 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 ELP4Q96EB1 424 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 GPR78Q96P69 363 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 KLHDC3Q9BQ90 382 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 C1QTNF6Q9BXI9 259 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 GRID1Q9ULK0 1009 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 SNX12Q9UMY4 172 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 TRIM77I1YAP6 450 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 SCDO00767 359 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 CYTIPO60759 359 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 NUDT14O95848 222 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 DDCP20711 480 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 NTSP30990 170 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 GSTM5P46439 218 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 PRIM2P49643 509 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 LGALS3BPQ08380 585 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 ACSM2AQ08AH3 577 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 MST1LQ2TV78 715 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 VPS26BQ4G0F5 336 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 MROH9Q5TGP6 573 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 ACSM2BQ68CK6 577 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 OR7E24Q6IFN5 339 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 SLC46A3Q7Z3Q1 461 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 ANKS4BQ8N8V4 417 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 GLIPR2Q9H4G4 154 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 EQTNQ9NQ60 294 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 MIEF1Q9NQG6 463 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 UBQLN4Q9NRR5 601 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 RNF14Q9UBS8 474 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 SNX24Q9Y343 169 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 TRAF6Q9Y4K3 522 aa13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 GPC6Q9Y625 555 aaPredicted RBP13.86□□□□□ -0.19
PDLIM7-210ENST00000503827 PKD1L1Q8TDX9 2849 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 A0A1W2PQD3 144 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 PPP6CO00743 305 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 SMIM24O75264 130 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 SNUPNO95149 360 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 IGHV3-9P01782 118 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 KRT6AP02538 564 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 KRT6BP04259 564 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 TIA1P31483 386 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■□□□□ 11.1
PDLIM7-210ENST00000503827 IL2RGP31785 369 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 KRT6CP48668 564 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 DVL1P1P54792 670 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 CDH15P55291 814 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 C2orf80Q0P641 193 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 NAB1Q13506 487 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 ZSWIM7Q19AV6 140 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 RPS27LQ71UM5 84 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 TOR1AIP2Q8NFQ8 470 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 ZNF75CPQ92670 426 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 EBPLQ9BY08 206 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 ZNF696Q9H7X3 374 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 TAS2R16Q9NYV7 291 aa13.85□□□□□ -0.19
PDLIM7-210ENST00000503827 A0A1W2PNR3 127 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 ATP6V1G2-DDX39BF2Z307 99 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 MANBAO00462 879 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 OR4F21O95013 312 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 NKX2-2O95096 273 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 STAMBPO95630 424 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 RPS17P08708 135 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 RBP1P09455 135 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 ANXA4P09525 319 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 TACSTD2P09758 323 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 IFI6P09912 130 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 PRPS2P11908 318 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 CHN1P15882 459 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 TSPAN8P19075 237 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 TYK2P29597 1187 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 LCN1P31025 176 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 STX2P32856 288 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 CDH13P55290 713 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 SELENBP1Q13228 472 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 TRADDQ15628 312 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 GABRA6Q16445 453 aa13.84□□□□□ -0.19
PDLIM7-210ENST00000503827 PRSS53Q2L4Q9 553 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms