RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FBXO17Q96EF6 278 aa15.91■□□□□ 0.14
CLN6-212ENST00000636020 ZNF747Q9BV97 191 aa15.91■□□□□ 0.14
CLN6-212ENST00000636020 RBM4Q9BWF3 364 aaKnown RBP15.91■□□□□ 0.14
CLN6-212ENST00000636020 HHATLQ9HCP6 504 aa15.91■□□□□ 0.14
CLN6-212ENST00000636020 SENP1Q9P0U3 644 aa15.91■□□□□ 0.14
CLN6-212ENST00000636020 KLHL9Q9P2J3 617 aa15.91■□□□□ 0.14
CLN6-212ENST00000636020 TNPO3Q9Y5L0 923 aaKnown RBP15.91■□□□□ 0.14
CLN6-212ENST00000636020 A0A087WV62 115 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 NPIPA5A0A0B4J1W7 369 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 A0A1W2PR80 420 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 C9JVG2 144 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 E7ESA3 106 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 NPIPA7E9PJI5 369 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 LILRA1O75019 489 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 RAD51DO75771 328 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 RGS9O75916 674 aaPredicted RBP15.9■□□□□ 0.14
CLN6-212ENST00000636020 PSMG1O95456 288 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 IL3P08700 152 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 NPIPA8P0DM63 369 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 PCMT1P22061 227 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 MPIP34949 423 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 CCNG1P51959 295 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 DVL1P1P54792 670 aaPredicted RBP15.9■□□□□ 0.14
CLN6-212ENST00000636020 HIST2H2BDQ6DRA6 164 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 LRRC17Q8N6Y2 441 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 ANKS4BQ8N8V4 417 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 ZNF775Q96BV0 537 aaPredicted RBP15.9■□□□□ 0.14
CLN6-212ENST00000636020 COQ10BQ9H8M1 238 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 FKRPQ9H9S5 495 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 SLC35C2Q9NQQ7 365 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 GIMAP4Q9NUV9 329 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 NTMQ9P121 344 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 PCDHB10Q9UN67 800 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 C19orf53Q9UNZ5 99 aaPredicted RBP15.9■□□□□ 0.14
CLN6-212ENST00000636020 PCDHGB1Q9Y5G3 927 aa15.9■□□□□ 0.14
CLN6-212ENST00000636020 IGHV3-15A0A0B4J1V0 119 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 STAMBPO95630 424 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 LINGO3P0C6S8 592 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 GIFP27352 417 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 ELK4P28324 431 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 ARFIP2P53365 341 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 HILS1P60008 231 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 TRAF3Q13114 568 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 TREML4Q6UXN2 200 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 USP43Q70EL4 1123 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 PLD6Q8N2A8 252 aaKnown RBP15.89■□□□□ 0.13
CLN6-212ENST00000636020 GATSQ8NAP1 163 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 OR4C3Q8NH37 302 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 ZNF75CPQ92670 426 aaPredicted RBP15.89■□□□□ 0.13
CLN6-212ENST00000636020 CDKL2Q92772 493 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 C1QTNF6Q9BXI9 259 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 KCNF1Q9H3M0 494 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 ELOVL6Q9H5J4 265 aa15.89■□□□□ 0.13
CLN6-212ENST00000636020 GOLGA6L10A0A0M3HER8 536 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 CIB4A0PJX0 185 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 GXYLT2A0PJZ3 443 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 UPK1AO00322 258 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 TP73O15350 636 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 OXSR1O95747 527 aaPredicted RBP15.88■□□□□ 0.13
CLN6-212ENST00000636020 PDYNP01213 254 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 NGFRP08138 427 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 CRABP2P29373 138 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 EIF1P41567 113 aaKnown RBP15.88■□□□□ 0.13
CLN6-212ENST00000636020 ZNHIT3Q15649 155 aaPredicted RBP15.88■□□□□ 0.13
CLN6-212ENST00000636020 TMEM176BQ3YBM2 270 aaPredicted RBP15.88■□□□□ 0.13
CLN6-212ENST00000636020 SHISA2Q6UWI4 295 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 CENPLQ8N0S6 344 aaPredicted RBP15.88■□□□□ 0.13
CLN6-212ENST00000636020 ZNF300Q96RE9 604 aaPredicted RBP15.88■□□□□ 0.13
CLN6-212ENST00000636020 VRK1Q99986 396 aaPredicted RBP15.88■□□□□ 0.13
CLN6-212ENST00000636020 LMF2Q9BU23 707 aaKnown RBP15.88■□□□□ 0.13
CLN6-212ENST00000636020 BRF2Q9HAW0 419 aa15.88■□□□□ 0.13
CLN6-212ENST00000636020 CCDC189A1A4V9 331 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 ZNF724A8MTY0 619 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 SSTR1P30872 391 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 GABRA3P34903 492 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 SPRP35270 261 aaPredicted RBP15.87■□□□□ 0.13
CLN6-212ENST00000636020 RASGEF1BQ0VAM2 473 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 FOXF1Q12946 379 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 SCGB2A2Q13296 93 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 GGTA1PQ4G0N0 100 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 UGT2A3Q6UWM9 527 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 LRRC8AQ8IWT6 810 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 ZNF100Q8IYN0 542 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLN6-212ENST00000636020 ACTRT1Q8TDG2 376 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 SH3YL1Q96HL8 342 aaPredicted RBP15.87■□□□□ 0.13
CLN6-212ENST00000636020 SNX18Q96RF0 628 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 BBS4Q96RK4 519 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 C3orf14Q9HBI5 128 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 ARMCX1Q9P291 453 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 MCM8Q9UJA3 840 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 TRAF6Q9Y4K3 522 aa15.87■□□□□ 0.13
CLN6-212ENST00000636020 FAM159BA6NKW6 160 aa15.86■□□□□ 0.13
CLN6-212ENST00000636020 GJE1A6NN92 205 aa15.86■□□□□ 0.13
CLN6-212ENST00000636020 MYO1GB0I1T2 1018 aa15.86■□□□□ 0.13
CLN6-212ENST00000636020 ZNF195O14628 629 aa15.86■□□□□ 0.13
CLN6-212ENST00000636020 CYTIPO60759 359 aa15.86■□□□□ 0.13
CLN6-212ENST00000636020 KCNH1O95259 989 aa15.86■□□□□ 0.13
CLN6-212ENST00000636020 LIMS1P48059 325 aa15.86■□□□□ 0.13
CLN6-212ENST00000636020 RAC3P60763 192 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms