RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 EFSO43281 561 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SIX3O95343 332 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ADCYAP1P18509 176 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RBX1P62877 108 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SH3BP2P78314 561 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ITKQ08881 620 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ST3GAL4Q11206 333 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GAGE1Q13065 139 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ARHGEF7Q14155 803 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RPS6KA2Q15349 733 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ST3GAL2Q16842 350 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 NDUFAF6Q330K2 333 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RNASE10Q5GAN6 216 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ATPAF1Q5TC12 328 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 METAP1DQ6UB28 335 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TMEM207Q6UWW9 146 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 LINGO4Q6UY18 593 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 FGD2Q7Z6J4 655 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TPRA1Q86W33 373 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ZNF619Q8N2I2 560 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RYBPQ8N488 228 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 OR2L8Q8NGY9 312 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SH3RF2Q8TEC5 729 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SELENOMQ8WWX9 145 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RHBDF1Q96CC6 855 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TSPAN17Q96FV3 270 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PITX2Q99697 317 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 IFT27Q9BW83 186 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GABARAPL1Q9H0R8 117 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SLC52A3Q9NQ40 469 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 MED17Q9NVC6 651 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 FAM86C1Q9NVL1 165 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GBF1Q92538 1859 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 MYOFQ9NZM1 2061 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PATJQ8NI35 1801 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PLXNA3P51805 1871 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 FAM86C2PA6NEL3 165 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 AP2A2O94973 939 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 OR4F21O95013 312 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CD2P06729 351 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SNRPCP09234 159 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 HOXA9P31269 272 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RGS4P49798 205 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CDKN2DP55273 166 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 WNT3AP56704 352 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PPP3R1P63098 170 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 MAP4K2Q12851 820 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RAB30Q15771 203 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 KCNMB1Q16558 191 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 UNC50Q53HI1 259 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 C3orf38Q5JPI3 329 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 NCMAPQ5T1S8 102 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 OR4F3Q6IEY1 312 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 H3F3CQ6NXT2 135 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RNF165Q6ZSG1 346 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ISCA2Q86U28 154 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PIM3Q86V86 326 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SLC44A3Q8N4M1 653 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TM9SF4Q92544 642 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 L3HYPDHQ96EM0 354 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 C5orf34Q96MH7 638 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TMEM208Q9BTX3 173 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 TAS2R16Q9NYV7 291 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SLAMF8Q9P0V8 285 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 MSRAQ9UJ68 235 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GPR55Q9Y2T6 319 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ASPDHA6ND91 283 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 NPIPB9F8W1W9 429 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 LINC01565O15544 149 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SOX15O60248 233 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GSTP1P09211 210 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ZNF888P0CJ79 500 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ITGB7P26010 798 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 LSM6P62312 80 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 LMAN2Q12907 356 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GAB1Q13480 694 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GAMTQ14353 236 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 SPIN4Q56A73 249 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 FAM46CQ5VWP2 391 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GSG1LQ6UXU4 331 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 QSOX2Q6ZRP7 698 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 DET1Q7L5Y6 550 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 ZNF683Q8IZ20 524 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 GPR137CQ8N3F9 429 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 C10orf53Q8N6V4 93 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RELL2Q8NC24 303 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 WFDC5Q8TCV5 224 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 C3orf49Q96BT1 292 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 MYOCQ99972 504 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RSRP1Q9BUV0 290 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 HDHD2Q9H0R4 259 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PIP5K1BO14986 540 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 C1RP00736 705 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 IL1AP01583 271 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PRPS2P11908 318 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 PAX1P15863 534 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 S100A2P29034 98 aa11.12□□□□□ -0.63
CDK5RAP3-232ENST00000584168 CSNK1EP49674 416 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms