RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SPACA9Q96E40 222 aaPredicted RBP12.33□□□□□ -0.44
PRPF39-202ENST00000424478 DNAJA3Q96EY1 480 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 DPH1Q9BZG8 443 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 DHRS12A0PJE2 317 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 SUV39H1O43463 412 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 SEMA7AO75326 666 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 AGR2O95994 175 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 IFI6P09912 130 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 CCR4P51679 360 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 DCAF7P61962 342 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 CRB2Q5IJ48 1285 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 INTS11Q5TA45 600 aaKnown RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 PROSER1Q86XN7 944 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 TNIP2Q8NFZ5 429 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 TP53INP1Q96A56 240 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 HSPBAP1Q96EW2 488 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 ZNF607Q96SK3 696 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 SPATA9Q9BWV2 254 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 ZNF552Q9H707 407 aaPredicted RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 MTHFD2LQ9H903 347 aaPredicted RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 BCL2L10Q9HD36 194 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 ABCG2Q9UNQ0 655 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 CARD8Q9Y2G2 431 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 TO15178 435 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 STAMBPO95630 424 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 CD96P40200 585 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 TRAP1Q12931 704 aaKnown RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 LAPTM4AQ15012 233 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 ABHD17BQ5VST6 288 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 CBLL1Q75N03 491 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 KRT73Q86Y46 540 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 PEX5LQ8IYB4 626 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 SLC22A8Q8TCC7 542 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 SLC47A1Q96FL8 570 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 JSRP1Q96MG2 331 aaPredicted RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 G6PC3Q9BUM1 346 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 SEMA6AQ9H2E6 1030 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 AP3M1Q9Y2T2 418 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 YARS2Q9Y2Z4 477 aaKnown RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 CPAMD8Q8IZJ3 1885 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 ACOX3O15254 700 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 EVI2BP34910 448 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 IST1P53990 364 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 SELENOWP63302 87 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 KCNJ10P78508 379 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 GANABQ14697 944 aaKnown RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 FBXW10Q5XX13 1052 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 DEF8Q6ZN54 512 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 TSEN54Q7Z6J9 526 aaKnown RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 CYP4Z2PQ8N1L4 340 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 TMCO5AQ8N6Q1 288 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 OR6T1Q8NGN1 323 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 HPF1Q9NWY4 346 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 THUMPD1Q9NXG2 353 aaKnown RBP12.32□□□□□ -0.44
PRPF39-202ENST00000424478 KLRF1Q9NZS2 232 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 LUZP4Q9P127 313 aa12.32□□□□□ -0.44
PRPF39-202ENST00000424478 RELNP78509 3460 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 TCRBV3S1A0A5B6 114 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 NPIPB9F8W1W9 429 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 AP3D1O14617 1153 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 PDGFAP04085 211 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 DNASE1L1P49184 302 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 ATP12AP54707 1039 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 SESN3P58005 492 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.31□□□□□ -0.44
PRPF39-202ENST00000424478 ZNF791Q3KP31 576 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-202ENST00000424478 CCDC80Q76M96 950 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 AMIGO2Q86SJ2 522 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 PATL1Q86TB9 770 aaKnown RBP12.31□□□□□ -0.44
PRPF39-202ENST00000424478 POGLUT1Q8NBL1 392 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 DUSP19Q8WTR2 217 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 NPAS1Q99742 590 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 SAP130Q9H0E3 1048 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 NKX1-2Q9UD57 310 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-202ENST00000424478 U3KQV3 271 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 SYNDIG1LA6NDD5 238 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 PCDH17O14917 1159 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 SERPINB7O75635 380 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 BAG2O95816 211 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 FBXO45P0C2W1 286 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 KCNJ5P48544 419 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 FOXK1P85037 733 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 RHDQ02161 417 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 MEP1AQ16819 746 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 TBCELQ5QJ74 424 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 H3F3CQ6NXT2 135 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 EIF3MQ7L2H7 374 aaKnown RBP12.31□□□□□ -0.44
PRPF39-202ENST00000424478 C7orf57Q8NEG2 295 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 HGDQ93099 445 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 PYURFQ96I23 114 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 IP6K3Q96PC2 410 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 TBL1XR1Q9BZK7 514 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 METTL7AQ9H8H3 244 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 UBQLN4Q9NRR5 601 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 ADPRHL2Q9NX46 363 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 ANAPC2Q9UJX6 822 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 CHCHD2Q9Y6H1 151 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-202ENST00000424478 NCKAP5O14513 1909 aa12.31□□□□□ -0.44
PRPF39-202ENST00000424478 SHISA8B8ZZ34 492 aa12.3□□□□□ -0.44
PRPF39-202ENST00000424478 H3BNX3 289 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms