RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MAFFQ9ULX9 164 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 A0A1B0GVT2 93 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF860A6NHJ4 632 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 PDGFAP04085 211 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 SYN1P17600 705 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 MMP12P39900 470 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC6A11P48066 632 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ARL4DP49703 201 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 P2RX3P56373 397 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 BTG1P62324 171 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 DEFA5Q01523 94 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 POU4F2Q12837 409 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 COL28A1Q2UY09 1125 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 HACD4Q5VWC8 232 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 LYPD4Q6UWN0 246 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 MEPCEQ7L2J0 689 aaKnown RBP11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 TPRA1Q86W33 373 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 C4orf36Q96KX1 117 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 AMDHD1Q96NU7 426 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 MED18Q9BUE0 208 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 C17orf113A0A1B0GUU1 675 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 HEPACAM2A8MVW5 462 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 NPIPB8E9PQR5 432 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 LGI1O95970 557 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 MT-ND4P03905 459 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ARFIP1P53367 373 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 DEFB134Q4QY38 66 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 RFPL4BQ6ZWI9 263 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 PRICKLE2Q7Z3G6 844 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 OR51L1Q8NGJ5 315 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ARL6Q9H0F7 186 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ABCG4Q9H172 646 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 MED20Q9H944 212 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 CKLFQ9UBR5 152 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 CCDC88CQ9P219 2028 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 IGLON5A6NGN9 336 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 LATO43561 262 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 TFP02787 698 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ELK1P19419 428 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 CLDN20P56880 219 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ACTA2P62736 377 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ACTG2P63267 376 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 TP53I3Q53FA7 332 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 SFXN4Q6P4A7 337 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ATCAYQ86WG3 371 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 GALNT11Q8NCW6 608 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 SFXN5Q8TD22 340 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ADAD1Q96M93 576 aaKnown RBP11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 SGPP1Q9BX95 441 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 ISYNA1Q9NPH2 558 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 V9GYH0 126 aa11.95□□□□□ -0.5
DNMT3A-202ENST00000321117 B8ZZF3 427 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 FMO6PO60774 539 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 TCRBP04435 133 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ACRP10323 421 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 HIST1H1TP22492 207 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 HTR1FP30939 366 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 EVI2BP34910 448 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 C21orf58P58505 322 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 PUM1Q14671 1186 aaKnown RBP eCLIP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 C6orf132Q5T0Z8 1188 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 TMEM239Q8WW34 195 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 BTBD2Q9BX70 525 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 EPHX3Q9H6B9 360 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 OR6C2Q9NZP2 312 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ADAM29Q9UKF5 820 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 PDCD11Q14690 1871 aaKnown RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC22A5O76082 557 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 KLHL18O94889 574 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 SOX18P35713 384 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 SIM1P81133 766 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 COL9A2Q14055 689 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 METTL11BQ5VVY1 283 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 HLA-DQA1Q5Y7H0 255 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ARHGAP11AQ6P4F7 1023 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 FIGNL1Q6PIW4 674 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 FAM198BQ6UWH4 519 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 Q6ZNB5 142 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 OR52E2Q8NGJ4 325 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 OR5M3Q8NGP4 307 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF563Q8TA94 476 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 C7orf50Q9BRJ6 194 aaKnown RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 BARHL1Q9BZE3 327 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 CCL26Q9Y258 94 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 H3BSH0 61 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 SNAPC5O75971 98 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 PPP1R3DO95685 299 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 DBIP07108 87 aaKnown RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ACTR1BP42025 376 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ACTR1AP61163 376 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 POU6F2P78424 691 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 HYAL2Q12891 473 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 HES5Q5TA89 166 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 CAMKVQ8NCB2 501 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 OR4K13Q8NH42 304 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 HCAR2Q8TDS4 363 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 GIMAP1Q8WWP7 306 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 ARHGAP9Q9BRR9 750 aa11.94□□□□□ -0.5
DNMT3A-202ENST00000321117 PITHD1Q9GZP4 211 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms