RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W SMC1P32908 1225 aa6.31□□□□□ -1.4
RPN7YPR108W KTR2P33550 425 aa6.31□□□□□ -1.4
RPN7YPR108W MCD4P36051 919 aa6.31□□□□□ -1.4
RPN7YPR108W JNM1P36224 373 aa6.31□□□□□ -1.4
RPN7YPR108W PPS1P38148 807 aa6.31□□□□□ -1.4
RPN7YPR108W GAA1P39012 614 aa6.31□□□□□ -1.4
RPN7YPR108W CIN4P39110 191 aa6.31□□□□□ -1.4
RPN7YPR108W GPB2P39717 880 aa6.31□□□□□ -1.4
RPN7YPR108W SHQ1P40486 507 aaPredicted RBP6.31□□□□□ -1.4
RPN7YPR108W RPC17P47076 161 aa6.31□□□□□ -1.4
RPN7YPR108W EEB1Q02891 456 aa6.31□□□□□ -1.4
RPN7YPR108W OMS1Q06668 471 aa6.31□□□□□ -1.4
RPN7YPR108W GUD1Q07729 489 aa6.31□□□□□ -1.4
RPN7YPR108W GAS5Q08193 484 aa6.31□□□□□ -1.4
RPN7YPR108W ISY1P21374 235 aaPredicted RBP6.3□□□□□ -1.4
RPN7YPR108W SEC21P32074 935 aaKnown RBP6.3□□□□□ -1.4
RPN7YPR108W BUD2P33314 1104 aa6.3□□□□□ -1.4
RPN7YPR108W BLI1P35727 113 aa6.3□□□□□ -1.4
RPN7YPR108W PSY4P38193 441 aa6.3□□□□□ -1.4
RPN7YPR108W ACA1P39970 489 aa6.3□□□□□ -1.4
RPN7YPR108W CIT3P43635 486 aa6.3□□□□□ -1.4
RPN7YPR108W AIP1P46680 615 aaKnown RBP6.3□□□□□ -1.4
RPN7YPR108W VPS53P47061 822 aa6.3□□□□□ -1.4
RPN7YPR108W PRP31P49704 494 aaPredicted RBP6.3□□□□□ -1.4
RPN7YPR108W YGR021WP53212 290 aa6.3□□□□□ -1.4
RPN7YPR108W SQS1P53866 767 aaKnown RBP6.3□□□□□ -1.4
RPN7YPR108W PGA2P53903 129 aa6.3□□□□□ -1.4
RPN7YPR108W KIN4Q01919 800 aa6.3□□□□□ -1.4
RPN7YPR108W SYH1Q02875 849 aaKnown RBP6.3□□□□□ -1.4
RPN7YPR108W CWC15Q03772 175 aaKnown RBP6.3□□□□□ -1.4
RPN7YPR108W AIM33Q04516 312 aa6.3□□□□□ -1.4
RPN7YPR108W YPL277CQ08989 487 aa6.3□□□□□ -1.4
RPN7YPR108W NUR1Q12066 484 aa6.3□□□□□ -1.4
RPN7YPR108W RAD18P10862 487 aa6.29□□□□□ -1.4
RPN7YPR108W TIM23P32897 222 aa6.29□□□□□ -1.4
RPN7YPR108W TOS3P43637 560 aa6.29□□□□□ -1.4
RPN7YPR108W NET1P47035 1189 aa6.29□□□□□ -1.4
RPN7YPR108W MTC3P53077 123 aa6.29□□□□□ -1.4
RPN7YPR108W GUP1P53154 560 aa6.29□□□□□ -1.4
RPN7YPR108W NCS2P53923 493 aaPredicted RBP6.29□□□□□ -1.4
RPN7YPR108W ALD6P54115 500 aaKnown RBP6.29□□□□□ -1.4
RPN7YPR108W YMR018WQ04364 514 aa6.29□□□□□ -1.4
RPN7YPR108W ADY4Q05955 493 aa6.29□□□□□ -1.4
RPN7YPR108W ATG23Q06671 453 aa6.29□□□□□ -1.4
RPN7YPR108W OXR1Q08952 273 aa6.29□□□□□ -1.4
RPN7YPR108W RPS6AP0CX37 236 aaKnown RBP6.28□□□□□ -1.4
RPN7YPR108W RPS6BP0CX38 236 aaPredicted RBP6.28□□□□□ -1.4
RPN7YPR108W CHS2P14180 963 aa6.28□□□□□ -1.4
RPN7YPR108W VMA2P16140 517 aaKnown RBP6.28□□□□□ -1.4
RPN7YPR108W SAM2P19358 384 aaKnown RBP6.28□□□□□ -1.4
RPN7YPR108W PDC6P26263 563 aaKnown RBP6.28□□□□□ -1.4
RPN7YPR108W SUV3P32580 737 aa6.28□□□□□ -1.4
RPN7YPR108W PCH2P38126 564 aa6.28□□□□□ -1.4
RPN7YPR108W TDA3P38758 523 aa6.28□□□□□ -1.4
RPN7YPR108W TIF4631P39935 952 aaKnown RBP6.28□□□□□ -1.4
RPN7YPR108W PEA2P40091 420 aa6.28□□□□□ -1.4
RPN7YPR108W ATG3P40344 310 aa6.28□□□□□ -1.4
RPN7YPR108W FET4P40988 552 aa6.28□□□□□ -1.4
RPN7YPR108W FIG4P42837 879 aa6.28□□□□□ -1.4
RPN7YPR108W CWC22P53333 577 aaKnown RBP6.28□□□□□ -1.4
RPN7YPR108W ESBP6P53918 673 aa6.28□□□□□ -1.4
RPN7YPR108W UME1Q03010 460 aa6.28□□□□□ -1.4
RPN7YPR108W MSH6Q03834 1242 aa6.28□□□□□ -1.4
RPN7YPR108W DON1Q05610 365 aa6.28□□□□□ -1.4
RPN7YPR108W YLR297WQ05899 129 aa6.28□□□□□ -1.4
RPN7YPR108W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
RPN7YPR108W TCO89Q08921 799 aa6.28□□□□□ -1.4
RPN7YPR108W HFI1Q12060 488 aa6.28□□□□□ -1.4
RPN7YPR108W HIF1Q12373 385 aa6.28□□□□□ -1.4
RPN7YPR108W ARP6Q12509 438 aa6.28□□□□□ -1.4
RPN7YPR108W RPB2P08518 1224 aaKnown RBP6.27□□□□□ -1.41
RPN7YPR108W NAT1P12945 854 aaKnown RBP6.27□□□□□ -1.41
RPN7YPR108W GFA1P14742 717 aaKnown RBP6.27□□□□□ -1.41
RPN7YPR108W HXT1P32465 570 aa6.27□□□□□ -1.41
RPN7YPR108W UGA4P32837 571 aa6.27□□□□□ -1.41
RPN7YPR108W XRS2P33301 854 aa6.27□□□□□ -1.41
RPN7YPR108W TVP38P36164 337 aa6.27□□□□□ -1.41
RPN7YPR108W PHO88P38264 188 aaPredicted RBP6.27□□□□□ -1.41
RPN7YPR108W SPP381P38282 291 aaPredicted RBP6.27□□□□□ -1.41
RPN7YPR108W RSC30P38781 883 aa6.27□□□□□ -1.41
RPN7YPR108W HUL4P40985 892 aa6.27□□□□□ -1.41
RPN7YPR108W RPL22BP56628 122 aaKnown RBP6.27□□□□□ -1.41
RPN7YPR108W YML037CQ03703 340 aa6.27□□□□□ -1.41
RPN7YPR108W CRD1Q07560 283 aa6.27□□□□□ -1.41
RPN7YPR108W MLH2Q07980 695 aa6.27□□□□□ -1.41
RPN7YPR108W APL4Q12028 832 aa6.27□□□□□ -1.41
RPN7YPR108W HKR1P41809 1802 aa6.27□□□□□ -1.41
RPN7YPR108W TUB2P02557 457 aaKnown RBP6.26□□□□□ -1.41
RPN7YPR108W YEL076C-AP0CX16 216 aa6.26□□□□□ -1.41
RPN7YPR108W YLR464WP0CX17 216 aa6.26□□□□□ -1.41
RPN7YPR108W SPO12P17123 173 aa6.26□□□□□ -1.41
RPN7YPR108W DEP1P31385 405 aa6.26□□□□□ -1.41
RPN7YPR108W COT1P32798 439 aa6.26□□□□□ -1.41
RPN7YPR108W SKG6P32900 734 aaPredicted RBP6.26□□□□□ -1.41
RPN7YPR108W SLD2P34252 453 aa6.26□□□□□ -1.41
RPN7YPR108W RTT107P38850 1070 aa6.26□□□□□ -1.41
RPN7YPR108W YEL076CP39971 216 aa6.26□□□□□ -1.41
RPN7YPR108W EFM4P40516 257 aa6.26□□□□□ -1.41
RPN7YPR108W YGR125WP53273 1036 aa6.26□□□□□ -1.41
RPN7YPR108W ATF2P53296 535 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 347.6 ms