RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C BRR1Q99177 341 aaPredicted RBP10.31□□□□□ -0.76
SSN3YPL042C HIR1P32479 840 aa10.31□□□□□ -0.76
SSN3YPL042C UGA4P32837 571 aa10.31□□□□□ -0.76
SSN3YPL042C FYV10P40492 516 aa10.31□□□□□ -0.76
SSN3YPL042C THI6P41835 540 aa10.31□□□□□ -0.76
SSN3YPL042C RSM7P47150 247 aa10.31□□□□□ -0.76
SSN3YPL042C YGR273CP53329 174 aa10.31□□□□□ -0.76
SSN3YPL042C RPN4Q03465 531 aa10.31□□□□□ -0.76
SSN3YPL042C UTP13Q05946 817 aaKnown RBP10.31□□□□□ -0.76
SSN3YPL042C MPC54Q08550 464 aa10.31□□□□□ -0.76
SSN3YPL042C OXR1Q08952 273 aa10.31□□□□□ -0.76
SSN3YPL042C TFB4Q12004 338 aa10.31□□□□□ -0.76
SSN3YPL042C PUF4P25339 888 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
SSN3YPL042C CDC15P27636 974 aa10.3□□□□□ -0.76
SSN3YPL042C SAC6P32599 642 aaKnown RBP10.3□□□□□ -0.76
SSN3YPL042C TGL1P34163 548 aa10.3□□□□□ -0.76
SSN3YPL042C VAB2P40003 282 aa10.3□□□□□ -0.76
SSN3YPL042C IES5P40060 125 aa10.3□□□□□ -0.76
SSN3YPL042C SET2P46995 733 aaKnown RBP10.3□□□□□ -0.76
SSN3YPL042C UBA2P52488 636 aa10.3□□□□□ -0.76
SSN3YPL042C BUL2Q03758 920 aaKnown RBP10.3□□□□□ -0.76
SSN3YPL042C YDR286CQ05530 114 aa10.3□□□□□ -0.76
SSN3YPL042C RRP36Q12481 300 aaPredicted RBP10.3□□□□□ -0.76
SSN3YPL042C PHR1P05066 565 aaKnown RBP RIP-Chip data10.29□□□□□ -0.76not detected
SSN3YPL042C KEX2P13134 814 aa10.29□□□□□ -0.76
SSN3YPL042C GSY1P23337 708 aa10.29□□□□□ -0.76
SSN3YPL042C MIC60P36112 540 aa10.29□□□□□ -0.76
SSN3YPL042C PBP2P38151 413 aaKnown RBP RIP-Chip data10.29□□□□□ -0.76not detected
SSN3YPL042C GAA1P39012 614 aa10.29□□□□□ -0.76
SSN3YPL042C RIC1P40395 1056 aa10.29□□□□□ -0.76
SSN3YPL042C HOP2P53187 214 aa10.29□□□□□ -0.76
SSN3YPL042C ALD6P54115 500 aaKnown RBP10.29□□□□□ -0.76
SSN3YPL042C MFM1Q02783 413 aa10.29□□□□□ -0.76
SSN3YPL042C CWC21Q03375 135 aaKnown RBP10.29□□□□□ -0.76
SSN3YPL042C YML083CQ04526 418 aa10.29□□□□□ -0.76
SSN3YPL042C ATG38Q05789 226 aaKnown RBP10.29□□□□□ -0.76
SSN3YPL042C YLH47Q06493 454 aa10.29□□□□□ -0.76
SSN3YPL042C NDL1Q06568 189 aa10.29□□□□□ -0.76
SSN3YPL042C PSR2Q07949 397 aa10.29□□□□□ -0.76
SSN3YPL042C LSO1Q3E827 93 aa10.29□□□□□ -0.76
SSN3YPL042C TOM1Q03280 3268 aa10.29□□□□□ -0.76
SSN3YPL042C ACP1P32463 125 aa10.28□□□□□ -0.76
SSN3YPL042C TBS1P38114 1094 aa10.28□□□□□ -0.76
SSN3YPL042C PCS60P38137 543 aaKnown RBP RIP-Chip data10.28□□□□□ -0.76not detected
SSN3YPL042C ORC6P38826 435 aa10.28□□□□□ -0.76
SSN3YPL042C GCD10P41814 478 aa10.28□□□□□ -0.76
SSN3YPL042C DAS1P47005 663 aa10.28□□□□□ -0.76
SSN3YPL042C LIF1P53150 421 aa10.28□□□□□ -0.76
SSN3YPL042C YML119WQ03208 357 aa10.28□□□□□ -0.76
SSN3YPL042C SAM1P10659 382 aaKnown RBP10.28□□□□□ -0.76
SSN3YPL042C CKA2P19454 339 aa10.28□□□□□ -0.76
SSN3YPL042C EFB1P32471 206 aaKnown RBP10.28□□□□□ -0.76
SSN3YPL042C NDE1P40215 560 aa10.28□□□□□ -0.76
SSN3YPL042C VTC2P43585 828 aa10.28□□□□□ -0.76
SSN3YPL042C NET1P47035 1189 aa10.28□□□□□ -0.76
SSN3YPL042C CBK1P53894 756 aa10.28□□□□□ -0.76
SSN3YPL042C YDR338CQ05497 695 aa10.28□□□□□ -0.76
SSN3YPL042C SPH1Q06160 661 aa10.28□□□□□ -0.76
SSN3YPL042C ALR1Q08269 859 aa10.28□□□□□ -0.76
SSN3YPL042C ARP6Q12509 438 aa10.28□□□□□ -0.76
SSN3YPL042C ILV1P00927 576 aaKnown RBP10.27□□□□□ -0.77
SSN3YPL042C POL4P25615 582 aa10.27□□□□□ -0.77
SSN3YPL042C RRN3P36070 627 aa10.27□□□□□ -0.77
SSN3YPL042C PET10P36139 283 aa10.27□□□□□ -0.77
SSN3YPL042C FMP10P40098 244 aa10.27□□□□□ -0.77
SSN3YPL042C UTP18P40362 594 aaPredicted RBP10.27□□□□□ -0.77
SSN3YPL042C SRB7P47822 140 aa10.27□□□□□ -0.77
SSN3YPL042C ORC4P54791 529 aa10.27□□□□□ -0.77
SSN3YPL042C LAP3Q01532 483 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77not detected
SSN3YPL042C ADY4Q05955 493 aa10.27□□□□□ -0.77
SSN3YPL042C GUD1Q07729 489 aa10.27□□□□□ -0.77
SSN3YPL042C TFC8Q12308 588 aa10.27□□□□□ -0.77
SSN3YPL042C SMC6Q12749 1114 aa10.27□□□□□ -0.77
SSN3YPL042C SES1P07284 462 aaKnown RBP10.26□□□□□ -0.77
SSN3YPL042C BUD14P27637 709 aa10.26□□□□□ -0.77
SSN3YPL042C SEC8P32855 1065 aa10.26□□□□□ -0.77
SSN3YPL042C MCD4P36051 919 aa10.26□□□□□ -0.77
SSN3YPL042C RRF1P38771 230 aa10.26□□□□□ -0.77
SSN3YPL042C ROG3P43602 733 aa10.26□□□□□ -0.77
SSN3YPL042C AFT2Q08957 416 aa10.26□□□□□ -0.77
SSN3YPL042C FKS1P38631 1876 aaKnown RBP10.26□□□□□ -0.77
SSN3YPL042C YEL076C-AP0CX16 216 aa10.25□□□□□ -0.77
SSN3YPL042C YLR464WP0CX17 216 aa10.25□□□□□ -0.77
SSN3YPL042C MRC1P25588 1096 aa10.25□□□□□ -0.77
SSN3YPL042C MCM2P29469 868 aa10.25□□□□□ -0.77
SSN3YPL042C PSE1P32337 1089 aaKnown RBP10.25□□□□□ -0.77
SSN3YPL042C YKR023WP36119 530 aaKnown RBP10.25□□□□□ -0.77
SSN3YPL042C POP2P39008 433 aa10.25□□□□□ -0.77
SSN3YPL042C SWD1P39706 426 aa10.25□□□□□ -0.77
SSN3YPL042C YEL076CP39971 216 aa10.25□□□□□ -0.77
SSN3YPL042C PXA1P41909 870 aa10.25□□□□□ -0.77
SSN3YPL042C WAR1Q03631 944 aa10.25□□□□□ -0.77
SSN3YPL042C WHI4Q07655 649 aaKnown RBP10.25□□□□□ -0.77
SSN3YPL042C MSC6Q08818 692 aaKnown RBP10.25□□□□□ -0.77
SSN3YPL042C SLX4Q12098 748 aa10.25□□□□□ -0.77
SSN3YPL042C PMS1P14242 873 aa10.25□□□□□ -0.77
SSN3YPL042C ISY1P21374 235 aaPredicted RBP10.25□□□□□ -0.77
SSN3YPL042C CDC60P26637 1090 aaKnown RBP10.25□□□□□ -0.77
SSN3YPL042C YKR018CP36114 725 aa10.25□□□□□ -0.77
SSN3YPL042C ADE17P38009 592 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms