RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W VFA1P40080 203 aa9.26□□□□□ -0.93
AMF1YOR378W VPS62P53285 467 aa9.26□□□□□ -0.93
AMF1YOR378W YCG1Q06680 1035 aa9.26□□□□□ -0.93
AMF1YOR378W ATG9Q12142 997 aa9.26□□□□□ -0.93
AMF1YOR378W RRP6Q12149 733 aaKnown RBP9.26□□□□□ -0.93
AMF1YOR378W VMA1P17255 1071 aaKnown RBP9.25□□□□□ -0.93
AMF1YOR378W MSS51P32335 436 aa9.25□□□□□ -0.93
AMF1YOR378W YDR090CQ03193 310 aa9.25□□□□□ -0.93
AMF1YOR378W ECM7Q06200 448 aa9.25□□□□□ -0.93
AMF1YOR378W HMI1Q12039 706 aa9.25□□□□□ -0.93
AMF1YOR378W MAM3Q12296 706 aa9.25□□□□□ -0.93
AMF1YOR378W WHI2P12611 486 aa9.24□□□□□ -0.93
AMF1YOR378W TMT1P32643 299 aa9.24□□□□□ -0.93
AMF1YOR378W NPP2P39997 493 aa9.24□□□□□ -0.93
AMF1YOR378W ENV11P53246 860 aa9.24□□□□□ -0.93
AMF1YOR378W CUS1Q02554 436 aaPredicted RBP9.24□□□□□ -0.93
AMF1YOR378W UTP14Q04500 899 aaKnown RBP9.24□□□□□ -0.93
AMF1YOR378W DUR3P33413 735 aa9.23□□□□□ -0.93
AMF1YOR378W PIN4P34217 668 aaKnown RBP RIP-Chip data9.23□□□□□ -0.93not detected
AMF1YOR378W VID24P38263 362 aa9.23□□□□□ -0.93
AMF1YOR378W SCD6P45978 349 aaKnown RBP RIP-Chip data9.23□□□□□ -0.93not detected
AMF1YOR378W HSH155P49955 971 aaKnown RBP9.23□□□□□ -0.93
AMF1YOR378W ORC5P50874 479 aa9.23□□□□□ -0.93
AMF1YOR378W TPO2P53283 614 aa9.23□□□□□ -0.93
AMF1YOR378W UME1Q03010 460 aa9.23□□□□□ -0.93
AMF1YOR378W YLR297WQ05899 129 aa9.23□□□□□ -0.93
AMF1YOR378W APL4Q12028 832 aa9.23□□□□□ -0.93
AMF1YOR378W SKG6P32900 734 aaPredicted RBP9.22□□□□□ -0.93
AMF1YOR378W XRS2P33301 854 aa9.22□□□□□ -0.93
AMF1YOR378W NIP100P33420 868 aa9.22□□□□□ -0.93
AMF1YOR378W MFT1P33441 392 aaKnown RBP9.22□□□□□ -0.93
AMF1YOR378W MNR2P35724 969 aa9.22□□□□□ -0.93
AMF1YOR378W YKL023WP36103 277 aaKnown RBP9.22□□□□□ -0.93
AMF1YOR378W UIP5P36137 443 aa9.22□□□□□ -0.93
AMF1YOR378W LDH1P38139 375 aa9.22□□□□□ -0.93
AMF1YOR378W SMC2P38989 1170 aaKnown RBP9.22□□□□□ -0.93
AMF1YOR378W ALD5P40047 520 aaKnown RBP9.22□□□□□ -0.93
AMF1YOR378W SAD1P43589 448 aa9.22□□□□□ -0.93
AMF1YOR378W SMC3P47037 1230 aa9.22□□□□□ -0.93
AMF1YOR378W ASN1P49089 572 aaKnown RBP9.22□□□□□ -0.93
AMF1YOR378W MNP1P53163 194 aaPredicted RBP9.22□□□□□ -0.93
AMF1YOR378W CTR9P89105 1077 aa9.22□□□□□ -0.93
AMF1YOR378W VPS72Q03388 795 aa9.22□□□□□ -0.93
AMF1YOR378W CSR1Q06705 408 aaKnown RBP9.22□□□□□ -0.93
AMF1YOR378W YPR078CQ06813 372 aa9.22□□□□□ -0.93
AMF1YOR378W SDS3P40505 327 aa9.21□□□□□ -0.93
AMF1YOR378W YAP5P40574 245 aa9.21□□□□□ -0.93
AMF1YOR378W TRS130Q03660 1102 aa9.21□□□□□ -0.93
AMF1YOR378W VPS38Q05919 439 aa9.21□□□□□ -0.93
AMF1YOR378W NEW1Q08972 1196 aaKnown RBP9.21□□□□□ -0.93
AMF1YOR378W PPR1P07272 904 aaPredicted RBP9.21□□□□□ -0.94
AMF1YOR378W SPO12P17123 173 aa9.21□□□□□ -0.94
AMF1YOR378W SMC1P32908 1225 aa9.21□□□□□ -0.94
AMF1YOR378W MRX3P38172 270 aa9.21□□□□□ -0.94
AMF1YOR378W MMS4P38257 691 aa9.21□□□□□ -0.94
AMF1YOR378W AZR1P50080 613 aa9.21□□□□□ -0.94
AMF1YOR378W ALF1P53904 254 aa9.21□□□□□ -0.94
AMF1YOR378W ERG5P54781 538 aa9.21□□□□□ -0.94
AMF1YOR378W ESC2Q06340 456 aa9.21□□□□□ -0.94
AMF1YOR378W RRP43P25359 394 aaPredicted RBP9.2□□□□□ -0.94
AMF1YOR378W PCH2P38126 564 aa9.2□□□□□ -0.94
AMF1YOR378W FTR1P40088 404 aa9.2□□□□□ -0.94
AMF1YOR378W ATG3P40344 310 aa9.2□□□□□ -0.94
AMF1YOR378W OSW7P43611 510 aa9.2□□□□□ -0.94
AMF1YOR378W UTP5Q04177 643 aaKnown RBP9.2□□□□□ -0.94
AMF1YOR378W SLX4Q12098 748 aa9.2□□□□□ -0.94
AMF1YOR378W HEM1P09950 548 aaPredicted RBP9.19□□□□□ -0.94
AMF1YOR378W NAT1P12945 854 aaKnown RBP9.19□□□□□ -0.94
AMF1YOR378W TUP1P16649 713 aa9.19□□□□□ -0.94
AMF1YOR378W PDC6P26263 563 aaKnown RBP9.19□□□□□ -0.94
AMF1YOR378W BUD2P33314 1104 aa9.19□□□□□ -0.94
AMF1YOR378W SHQ1P40486 507 aaPredicted RBP9.19□□□□□ -0.94
AMF1YOR378W IES1P43579 692 aa9.19□□□□□ -0.94
AMF1YOR378W STU2P46675 888 aa9.19□□□□□ -0.94
AMF1YOR378W ESBP6P53918 673 aa9.19□□□□□ -0.94
AMF1YOR378W RPA49Q01080 415 aaPredicted RBP9.19□□□□□ -0.94
AMF1YOR378W OPY2Q06810 360 aa9.19□□□□□ -0.94
AMF1YOR378W SHS1Q07657 551 aa9.19□□□□□ -0.94
AMF1YOR378W YDL206WQ12424 762 aa9.19□□□□□ -0.94
AMF1YOR378W ZPS1Q12512 249 aa9.19□□□□□ -0.94
AMF1YOR378W MTF2P10849 440 aa9.18□□□□□ -0.94
AMF1YOR378W KIP1P28742 1111 aa9.18□□□□□ -0.94
AMF1YOR378W SWI3P32591 825 aa9.18□□□□□ -0.94
AMF1YOR378W JSN1P47135 1091 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
AMF1YOR378W UBP3Q01477 912 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
AMF1YOR378W TBF1Q02457 562 aa9.18□□□□□ -0.94
AMF1YOR378W IWR1Q07532 353 aaPredicted RBP9.18□□□□□ -0.94
AMF1YOR378W ADE2P21264 571 aaKnown RBP9.17□□□□□ -0.94
AMF1YOR378W RAD54P32863 898 aa9.17□□□□□ -0.94
AMF1YOR378W MUK1Q02866 612 aa9.17□□□□□ -0.94
AMF1YOR378W DOT1Q04089 582 aaKnown RBP9.17□□□□□ -0.94
AMF1YOR378W RGA2Q06407 1009 aa9.17□□□□□ -0.94
AMF1YOR378W TSR1Q07381 788 aaKnown RBP9.17□□□□□ -0.94
AMF1YOR378W YOL098CQ12496 1037 aa9.17□□□□□ -0.94
AMF1YOR378W SEC23P15303 768 aaKnown RBP9.16□□□□□ -0.94
AMF1YOR378W GLN3P18494 730 aa9.16□□□□□ -0.94
AMF1YOR378W TRM2P33753 639 aa9.16□□□□□ -0.94
AMF1YOR378W JNM1P36224 373 aa9.16□□□□□ -0.94
AMF1YOR378W KIC1P38692 1080 aa9.16□□□□□ -0.94
AMF1YOR378W YAP1801P38856 637 aa9.16□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms