RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W YVC1Q12324 675 aa2.45□□□□□ -2.02
HSH155YMR288W YOR131CQ12486 218 aa2.45□□□□□ -2.02
HSH155YMR288W SRO9P25567 434 aaKnown RBP2.44□□□□□ -2.02
HSH155YMR288W SBA1P28707 216 aaKnown RBP2.44□□□□□ -2.02
HSH155YMR288W YSC84P32793 468 aa2.44□□□□□ -2.02
HSH155YMR288W MRP8P35719 219 aa2.44□□□□□ -2.02
HSH155YMR288W YGL176CP46945 554 aa2.44□□□□□ -2.02
HSH155YMR288W NAN1Q02931 896 aaKnown RBP2.44□□□□□ -2.02
HSH155YMR288W TIF35Q04067 274 aaKnown RBP2.44□□□□□ -2.02
HSH155YMR288W SPO75Q07798 868 aa2.44□□□□□ -2.02
HSH155YMR288W OSH2Q12451 1283 aa2.44□□□□□ -2.02
HSH155YMR288W AFG2P32794 780 aa2.44□□□□□ -2.02
HSH155YMR288W YKU70P32807 602 aa2.44□□□□□ -2.02
HSH155YMR288W YHR131CP38835 850 aa2.44□□□□□ -2.02
HSH155YMR288W RPN3P40016 523 aaKnown RBP2.44□□□□□ -2.02
HSH155YMR288W YJL049WP47048 450 aa2.44□□□□□ -2.02
HSH155YMR288W AHC1Q12433 566 aa2.44□□□□□ -2.02
HSH155YMR288W ACC1Q00955 2233 aaKnown RBP2.44□□□□□ -2.02
HSH155YMR288W HEM13P11353 328 aaKnown RBP2.43□□□□□ -2.02
HSH155YMR288W ABD1P32783 436 aaPredicted RBP2.43□□□□□ -2.02
HSH155YMR288W POL12P38121 705 aaPredicted RBP2.43□□□□□ -2.02
HSH155YMR288W SPS1P08458 490 aa2.43□□□□□ -2.02
HSH155YMR288W HPR1P17629 752 aaKnown RBP2.43□□□□□ -2.02
HSH155YMR288W PRP9P19736 530 aaKnown RBP2.43□□□□□ -2.02
HSH155YMR288W AGP1P25376 633 aa2.43□□□□□ -2.02
HSH155YMR288W SWE1P32944 819 aa2.43□□□□□ -2.02
HSH155YMR288W APE3P37302 537 aaKnown RBP2.43□□□□□ -2.02
HSH155YMR288W GNP1P48813 663 aa2.43□□□□□ -2.02
HSH155YMR288W YGR053CP53234 283 aa2.43□□□□□ -2.02
HSH155YMR288W ENV11P53246 860 aa2.43□□□□□ -2.02
HSH155YMR288W SRP1Q02821 542 aaKnown RBP2.43□□□□□ -2.02
HSH155YMR288W EAR1Q03212 550 aa2.43□□□□□ -2.02
HSH155YMR288W TAF8Q03750 510 aa2.43□□□□□ -2.02
HSH155YMR288W SSY1Q03770 852 aa2.43□□□□□ -2.02
HSH155YMR288W UTP20P35194 2493 aaKnown RBP2.43□□□□□ -2.02
HSH155YMR288W RNQ1P25367 405 aa2.42□□□□□ -2.02
HSH155YMR288W DUT1P33317 147 aa2.42□□□□□ -2.02
HSH155YMR288W PIK1P39104 1066 aa2.42□□□□□ -2.02
HSH155YMR288W TIM50Q02776 476 aa2.42□□□□□ -2.02
HSH155YMR288W EEB1Q02891 456 aa2.42□□□□□ -2.02
HSH155YMR288W KIN2P13186 1147 aaKnown RBP2.42□□□□□ -2.02
HSH155YMR288W SRP40P32583 406 aaPredicted RBP2.42□□□□□ -2.02
HSH155YMR288W ESL2P36168 1195 aa2.42□□□□□ -2.02
HSH155YMR288W HXT13P39924 564 aa2.42□□□□□ -2.02
HSH155YMR288W HXT17P53631 564 aa2.42□□□□□ -2.02
HSH155YMR288W HXT15P54854 567 aa2.42□□□□□ -2.02
HSH155YMR288W SDH1Q00711 640 aa2.42□□□□□ -2.02
HSH155YMR288W RSM24Q03976 319 aa2.42□□□□□ -2.02
HSH155YMR288W HKR1P41809 1802 aa2.42□□□□□ -2.02
HSH155YMR288W YER152CP10356 443 aa2.41□□□□□ -2.02
HSH155YMR288W MSM1P22438 575 aa2.41□□□□□ -2.02
HSH155YMR288W AAR2P32357 355 aaPredicted RBP2.41□□□□□ -2.02
HSH155YMR288W PBY1P38254 753 aa2.41□□□□□ -2.02
HSH155YMR288W GEM1P39722 662 aa2.41□□□□□ -2.02
HSH155YMR288W SAH1P39954 449 aaKnown RBP2.41□□□□□ -2.02
HSH155YMR288W MPH1P40562 993 aa2.41□□□□□ -2.02
HSH155YMR288W TIM54P47045 478 aa2.41□□□□□ -2.02
HSH155YMR288W ECL1P48235 211 aa2.41□□□□□ -2.02
HSH155YMR288W RSC58Q07979 502 aa2.41□□□□□ -2.02
HSH155YMR288W CDC11P32458 415 aa2.41□□□□□ -2.02
HSH155YMR288W PFF1P38244 976 aa2.41□□□□□ -2.02
HSH155YMR288W OYE3P41816 400 aaPredicted RBP2.41□□□□□ -2.02
HSH155YMR288W SHE9Q04172 456 aa2.41□□□□□ -2.02
HSH155YMR288W YDR306CQ06640 478 aa2.41□□□□□ -2.02
HSH155YMR288W ACM1Q08981 209 aa2.41□□□□□ -2.02
HSH155YMR288W GCD1P09032 578 aaPredicted RBP2.41□□□□□ -2.02
HSH155YMR288W GRX1P25373 110 aaKnown RBP2.41□□□□□ -2.02
HSH155YMR288W ARE1P25628 610 aa2.41□□□□□ -2.02
HSH155YMR288W VBA5P36172 582 aa2.41□□□□□ -2.02
HSH155YMR288W MDG1P53885 366 aa2.41□□□□□ -2.02
HSH155YMR288W DUS3Q06053 668 aaKnown RBP2.41□□□□□ -2.02
HSH155YMR288W CDC53Q12018 815 aaKnown RBP2.41□□□□□ -2.02
HSH155YMR288W LYS2P07702 1392 aa2.4□□□□□ -2.02
HSH155YMR288W SPF1P39986 1215 aaKnown RBP2.4□□□□□ -2.02
HSH155YMR288W IRR1P40541 1150 aa2.4□□□□□ -2.02
HSH155YMR288W BUD27P43573 796 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
HSH155YMR288W OSW7P43611 510 aa2.4□□□□□ -2.02
HSH155YMR288W DOS2P54858 310 aa2.4□□□□□ -2.02
HSH155YMR288W ADE8P04161 214 aa2.4□□□□□ -2.03
HSH155YMR288W APL1P27351 700 aa2.4□□□□□ -2.03
HSH155YMR288W HSP104P31539 908 aaKnown RBP2.4□□□□□ -2.03
HSH155YMR288W HSP78P33416 811 aa2.4□□□□□ -2.03
HSH155YMR288W RFC5P38251 354 aa2.4□□□□□ -2.03
HSH155YMR288W PEX7P39108 375 aa2.4□□□□□ -2.03
HSH155YMR288W NIT1P40447 199 aa2.4□□□□□ -2.03
HSH155YMR288W HUL4P40985 892 aa2.4□□□□□ -2.03
HSH155YMR288W ERP6P53198 216 aa2.4□□□□□ -2.03
HSH155YMR288W IRC3Q06683 689 aa2.4□□□□□ -2.03
HSH155YMR288W SSF2Q12153 453 aaPredicted RBP2.4□□□□□ -2.03
HSH155YMR288W OSW2Q12202 724 aa2.4□□□□□ -2.03
HSH155YMR288W SVS1Q12254 260 aa2.4□□□□□ -2.03
HSH155YMR288W YML133CQ03099 1374 aa2.4□□□□□ -2.03
HSH155YMR288W SSK22P25390 1331 aaPredicted RBP2.4□□□□□ -2.03
HSH155YMR288W RPL11AP0C0W9 174 aaKnown RBP2.39□□□□□ -2.03
HSH155YMR288W GAS1P22146 559 aaKnown RBP2.39□□□□□ -2.03
HSH155YMR288W YKL091CP33324 310 aaKnown RBP2.39□□□□□ -2.03
HSH155YMR288W SEG2P34250 1132 aa2.39□□□□□ -2.03
HSH155YMR288W YBR184WP38299 523 aa2.39□□□□□ -2.03
HSH155YMR288W SEC26P41810 973 aaKnown RBP2.39□□□□□ -2.03
HSH155YMR288W VPS62P53285 467 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms