RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C VPS30Q02948 557 aa2.49□□□□□ -2.01
RFX1YLR176C CLU1Q03690 1277 aaKnown RBP2.49□□□□□ -2.01
RFX1YLR176C SSL1Q04673 461 aaPredicted RBP2.49□□□□□ -2.01
RFX1YLR176C MPH2P0CD99 609 aa2.49□□□□□ -2.01
RFX1YLR176C URA1P28272 314 aaPredicted RBP2.49□□□□□ -2.01
RFX1YLR176C ALG2P43636 503 aa2.49□□□□□ -2.01
RFX1YLR176C HDA1P53973 706 aa2.49□□□□□ -2.01
RFX1YLR176C RPS9AO13516 197 aaKnown RBP2.48□□□□□ -2.01
RFX1YLR176C PHR1P05066 565 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
RFX1YLR176C RPP2AP05319 106 aaKnown RBP2.48□□□□□ -2.01
RFX1YLR176C ATG19P35193 415 aa2.48□□□□□ -2.01
RFX1YLR176C EMC3P36039 253 aa2.48□□□□□ -2.01
RFX1YLR176C MPT5P39016 859 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
RFX1YLR176C CHA4P43634 648 aa2.48□□□□□ -2.01
RFX1YLR176C NIT3P49954 291 aa2.48□□□□□ -2.01
RFX1YLR176C MCM6P53091 1017 aaKnown RBP2.48□□□□□ -2.01
RFX1YLR176C TYE7P33122 291 aaPredicted RBP2.48□□□□□ -2.01
RFX1YLR176C YKL222CP35995 705 aa2.48□□□□□ -2.01
RFX1YLR176C GIP4P39732 760 aa2.48□□□□□ -2.01
RFX1YLR176C YIL108WP40483 696 aaKnown RBP2.48□□□□□ -2.01
RFX1YLR176C URM1P40554 99 aaPredicted RBP2.48□□□□□ -2.01
RFX1YLR176C HSV2P50079 448 aaPredicted RBP2.48□□□□□ -2.01
RFX1YLR176C YGR283CP53336 341 aaPredicted RBP2.48□□□□□ -2.01
RFX1YLR176C YKR011CQ02209 353 aa2.48□□□□□ -2.01
RFX1YLR176C UPC2Q12151 913 aa2.48□□□□□ -2.01
RFX1YLR176C NPC2Q12408 173 aa2.48□□□□□ -2.01
RFX1YLR176C KCS1Q12494 1050 aa2.48□□□□□ -2.01
RFX1YLR176C PHO8P11491 566 aa2.47□□□□□ -2.01
RFX1YLR176C DAL7P21826 554 aa2.47□□□□□ -2.01
RFX1YLR176C SED4P25365 1065 aa2.47□□□□□ -2.01
RFX1YLR176C CTS1P29029 562 aa2.47□□□□□ -2.01
RFX1YLR176C SHM2P37291 469 aaKnown RBP2.47□□□□□ -2.01
RFX1YLR176C GDH3P39708 457 aa2.47□□□□□ -2.01
RFX1YLR176C NCS6P53088 359 aa2.47□□□□□ -2.01
RFX1YLR176C FPR4Q06205 392 aaPredicted RBP2.47□□□□□ -2.01
RFX1YLR176C YLR125WQ12138 136 aa2.47□□□□□ -2.01
RFX1YLR176C RAD53P22216 821 aa2.47□□□□□ -2.01
RFX1YLR176C YCL002CP25565 263 aa2.47□□□□□ -2.01
RFX1YLR176C CYS3P31373 394 aaKnown RBP2.47□□□□□ -2.01
RFX1YLR176C OSW7P43611 510 aa2.47□□□□□ -2.01
RFX1YLR176C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
RFX1YLR176C MNN10P50108 393 aaKnown RBP2.47□□□□□ -2.01
RFX1YLR176C TAD1P53065 400 aa2.47□□□□□ -2.01
RFX1YLR176C PUS2P53167 370 aa2.47□□□□□ -2.01
RFX1YLR176C DAM1P53267 343 aa2.47□□□□□ -2.01
RFX1YLR176C NOG2P53742 486 aaKnown RBP2.47□□□□□ -2.01
RFX1YLR176C STE11P23561 717 aa2.46□□□□□ -2.02
RFX1YLR176C STE14P32584 239 aa2.46□□□□□ -2.02
RFX1YLR176C SPC29P33419 253 aa2.46□□□□□ -2.02
RFX1YLR176C MAL11P53048 616 aa2.46□□□□□ -2.02
RFX1YLR176C ORC1P54784 914 aaPredicted RBP2.46□□□□□ -2.02
RFX1YLR176C LRS4Q04087 347 aaKnown RBP2.46□□□□□ -2.02
RFX1YLR176C YDR514CQ04408 483 aa2.46□□□□□ -2.02
RFX1YLR176C MET7Q08645 548 aa2.46□□□□□ -2.02
RFX1YLR176C FBP1P09201 348 aa2.46□□□□□ -2.02
RFX1YLR176C PER1P25625 357 aa2.46□□□□□ -2.02
RFX1YLR176C THI4P32318 326 aa2.46□□□□□ -2.02
RFX1YLR176C HAL9Q12180 1030 aa2.46□□□□□ -2.02
RFX1YLR176C YOR022CQ12204 715 aa2.46□□□□□ -2.02
RFX1YLR176C PRC1P00729 532 aa2.45□□□□□ -2.02
RFX1YLR176C CAD1P24813 409 aaKnown RBP2.45□□□□□ -2.02
RFX1YLR176C SAP190P36123 1033 aa2.45□□□□□ -2.02
RFX1YLR176C SDP1P40479 209 aa2.45□□□□□ -2.02
RFX1YLR176C EXG2P52911 562 aa2.45□□□□□ -2.02
RFX1YLR176C RNH70P53331 553 aa2.45□□□□□ -2.02
RFX1YLR176C DUS1P53759 423 aaKnown RBP2.45□□□□□ -2.02
RFX1YLR176C REH1Q06709 432 aa2.45□□□□□ -2.02
RFX1YLR176C HCM1P25364 564 aa2.44□□□□□ -2.02
RFX1YLR176C KAR4P25583 335 aa2.44□□□□□ -2.02
RFX1YLR176C CTF8P38877 133 aa2.44□□□□□ -2.02
RFX1YLR176C TY4A-JP47023 414 aa2.44□□□□□ -2.02
RFX1YLR176C PHO23P50947 330 aa2.44□□□□□ -2.02
RFX1YLR176C ATP25Q03153 612 aa2.44□□□□□ -2.02
RFX1YLR176C PPG1P32838 368 aa2.44□□□□□ -2.02
RFX1YLR176C YHR078WP38799 552 aa2.44□□□□□ -2.02
RFX1YLR176C DSS1P39112 969 aa2.44□□□□□ -2.02
RFX1YLR176C RSC3Q06639 885 aa2.44□□□□□ -2.02
RFX1YLR176C PMA1P05030 918 aaKnown RBP2.43□□□□□ -2.02
RFX1YLR176C MET6P05694 767 aaKnown RBP2.43□□□□□ -2.02
RFX1YLR176C PFK1P16861 987 aaKnown RBP2.43□□□□□ -2.02
RFX1YLR176C MEF1P25039 761 aa2.43□□□□□ -2.02
RFX1YLR176C SEC21P32074 935 aaKnown RBP2.43□□□□□ -2.02
RFX1YLR176C DCG1P32460 244 aa2.43□□□□□ -2.02
RFX1YLR176C MSS4P38994 779 aa2.43□□□□□ -2.02
RFX1YLR176C SHR5P41912 237 aa2.43□□□□□ -2.02
RFX1YLR176C SLI1P53304 468 aa2.43□□□□□ -2.02
RFX1YLR176C ALG12P53730 551 aa2.43□□□□□ -2.02
RFX1YLR176C SLU7Q02775 382 aaKnown RBP2.43□□□□□ -2.02
RFX1YLR176C LAS17Q12446 633 aa2.43□□□□□ -2.02
RFX1YLR176C VBA3P25594 458 aa2.43□□□□□ -2.02
RFX1YLR176C MSH2P25847 964 aa2.43□□□□□ -2.02
RFX1YLR176C RLP7P40693 322 aaKnown RBP2.43□□□□□ -2.02
RFX1YLR176C ALY2P47029 1046 aa2.43□□□□□ -2.02
RFX1YLR176C PEX19Q07418 342 aa2.43□□□□□ -2.02
RFX1YLR176C GUP2Q08929 609 aa2.43□□□□□ -2.02
RFX1YLR176C SWM1Q12379 170 aa2.43□□□□□ -2.02
RFX1YLR176C YBR182C-AQ8TGU6 64 aa2.43□□□□□ -2.02
RFX1YLR176C MDM12Q92328 271 aa2.43□□□□□ -2.02
RFX1YLR176C DIF1O13577 133 aa2.42□□□□□ -2.02
RFX1YLR176C CDC9P04819 755 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms