RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C PDB1P32473 366 aaKnown RBP11.88□□□□□ -0.51
SPT8YLR055C FKS1P38631 1876 aaKnown RBP11.88□□□□□ -0.51
SPT8YLR055C VPS29P38759 282 aa11.88□□□□□ -0.51
SPT8YLR055C CCT2P39076 527 aaKnown RBP11.88□□□□□ -0.51
SPT8YLR055C ATG32P40458 529 aa11.88□□□□□ -0.51
SPT8YLR055C YJR039WP47107 1121 aa11.88□□□□□ -0.51
SPT8YLR055C SGM1P47166 707 aa11.88□□□□□ -0.51
SPT8YLR055C CTR1P49573 406 aa11.88□□□□□ -0.51
SPT8YLR055C TOF1P53840 1238 aa11.88□□□□□ -0.51
SPT8YLR055C YLR326WQ06170 240 aaKnown RBP11.88□□□□□ -0.51
SPT8YLR055C CSR1Q06705 408 aaKnown RBP11.88□□□□□ -0.51
SPT8YLR055C TY1B-AO13527 1196 aaKnown RBP11.87□□□□□ -0.51
SPT8YLR055C ARG1P22768 420 aa11.87□□□□□ -0.51
SPT8YLR055C TKL1P23254 680 aaKnown RBP11.87□□□□□ -0.51
SPT8YLR055C REG2P38232 338 aa11.87□□□□□ -0.51
SPT8YLR055C YNL320WP42840 284 aa11.87□□□□□ -0.51
SPT8YLR055C YFL034WP43564 1073 aa11.87□□□□□ -0.51
SPT8YLR055C PTA1Q01329 785 aaPredicted RBP11.87□□□□□ -0.51
SPT8YLR055C OYE2Q03558 400 aaKnown RBP11.87□□□□□ -0.51
SPT8YLR055C YPR078CQ06813 372 aa11.87□□□□□ -0.51
SPT8YLR055C ISA1Q07821 250 aaPredicted RBP11.87□□□□□ -0.51
SPT8YLR055C MLH2Q07980 695 aa11.87□□□□□ -0.51
SPT8YLR055C RIO1Q12196 484 aaKnown RBP11.87□□□□□ -0.51
SPT8YLR055C ERG11P10614 530 aa11.86□□□□□ -0.51
SPT8YLR055C APL1P27351 700 aa11.86□□□□□ -0.51
SPT8YLR055C SWI3P32591 825 aa11.86□□□□□ -0.51
SPT8YLR055C SMC1P32908 1225 aa11.86□□□□□ -0.51
SPT8YLR055C NIP100P33420 868 aa11.86□□□□□ -0.51
SPT8YLR055C OAF3P36023 863 aa11.86□□□□□ -0.51
SPT8YLR055C MMM1P41800 426 aa11.86□□□□□ -0.51
SPT8YLR055C RPC17P47076 161 aa11.86□□□□□ -0.51
SPT8YLR055C KAP114P53067 1004 aa11.86□□□□□ -0.51
SPT8YLR055C CBK1P53894 756 aa11.86□□□□□ -0.51
SPT8YLR055C DIG1Q03063 452 aaKnown RBP11.86□□□□□ -0.51
SPT8YLR055C HOT1Q03213 719 aa11.86□□□□□ -0.51
SPT8YLR055C ECI1Q05871 280 aa11.86□□□□□ -0.51
SPT8YLR055C MET7Q08645 548 aa11.86□□□□□ -0.51
SPT8YLR055C SMC6Q12749 1114 aa11.86□□□□□ -0.51
SPT8YLR055C RGT1P32862 1170 aa11.86□□□□□ -0.51
SPT8YLR055C MXR1P40029 184 aa11.86□□□□□ -0.51
SPT8YLR055C ORC4P54791 529 aa11.86□□□□□ -0.51
SPT8YLR055C ADA2Q02336 434 aa11.86□□□□□ -0.51
SPT8YLR055C MSC6Q08818 692 aaKnown RBP11.86□□□□□ -0.51
SPT8YLR055C MAK16P10962 306 aaPredicted RBP11.85□□□□□ -0.51
SPT8YLR055C CKA2P19454 339 aa11.85□□□□□ -0.51
SPT8YLR055C GAL11P19659 1081 aa11.85□□□□□ -0.51
SPT8YLR055C GSY1P23337 708 aa11.85□□□□□ -0.51
SPT8YLR055C LOS1P33418 1100 aaPredicted RBP11.85□□□□□ -0.51
SPT8YLR055C GAA1P39012 614 aa11.85□□□□□ -0.51
SPT8YLR055C PSF2P40359 213 aa11.85□□□□□ -0.51
SPT8YLR055C ENV11P53246 860 aa11.85□□□□□ -0.51
SPT8YLR055C ZPR1P53303 486 aaKnown RBP11.85□□□□□ -0.51
SPT8YLR055C YDR461C-AQ2V2P7 80 aa11.85□□□□□ -0.51
SPT8YLR055C ILV1P00927 576 aaKnown RBP11.84□□□□□ -0.51
SPT8YLR055C PYC1P11154 1178 aaKnown RBP11.84□□□□□ -0.51
SPT8YLR055C SQT1P35184 431 aa11.84□□□□□ -0.51
SPT8YLR055C YGL039WP53183 348 aaKnown RBP11.84□□□□□ -0.51
SPT8YLR055C MFM1Q02783 413 aa11.84□□□□□ -0.51
SPT8YLR055C WHI4Q07655 649 aaKnown RBP11.84□□□□□ -0.51
SPT8YLR055C NCS2P53923 493 aaPredicted RBP11.83□□□□□ -0.51
SPT8YLR055C YEL076C-AP0CX16 216 aa11.83□□□□□ -0.52
SPT8YLR055C YLR464WP0CX17 216 aa11.83□□□□□ -0.52
SPT8YLR055C TFC4P33339 1025 aa11.83□□□□□ -0.52
SPT8YLR055C PPS1P38148 807 aa11.83□□□□□ -0.52
SPT8YLR055C YEL076CP39971 216 aa11.83□□□□□ -0.52
SPT8YLR055C UTP14Q04500 899 aaKnown RBP11.83□□□□□ -0.52
SPT8YLR055C PIG1Q06216 648 aa11.83□□□□□ -0.52
SPT8YLR055C UBP5P39944 805 aa11.82□□□□□ -0.52
SPT8YLR055C BIM1P40013 344 aa11.82□□□□□ -0.52
SPT8YLR055C VPS53P47061 822 aa11.82□□□□□ -0.52
SPT8YLR055C ILM1P47155 203 aa11.82□□□□□ -0.52
SPT8YLR055C HUL5P53119 910 aa11.82□□□□□ -0.52
SPT8YLR055C USA1Q03714 838 aa11.82□□□□□ -0.52
SPT8YLR055C YLH47Q06493 454 aa11.82□□□□□ -0.52
SPT8YLR055C ICL2Q12031 575 aa11.82□□□□□ -0.52
SPT8YLR055C RPB2P08518 1224 aaKnown RBP11.81□□□□□ -0.52
SPT8YLR055C PRP9P19736 530 aaKnown RBP11.81□□□□□ -0.52
SPT8YLR055C YUR1P26725 428 aa11.81□□□□□ -0.52
SPT8YLR055C DBP7P36120 742 aaKnown RBP11.81□□□□□ -0.52
SPT8YLR055C UBP15P50101 1230 aa11.81□□□□□ -0.52
SPT8YLR055C YGR021WP53212 290 aa11.81□□□□□ -0.52
SPT8YLR055C YMR321CQ04898 105 aa11.81□□□□□ -0.52
SPT8YLR055C YCR051WP25631 222 aa11.81□□□□□ -0.52
SPT8YLR055C UBP11P36026 717 aa11.81□□□□□ -0.52
SPT8YLR055C ESS1P22696 170 aa11.8□□□□□ -0.52
SPT8YLR055C RAM2P29703 316 aa11.8□□□□□ -0.52
SPT8YLR055C PGM1P33401 570 aaKnown RBP11.8□□□□□ -0.52
SPT8YLR055C YJR142WP47173 342 aa11.8□□□□□ -0.52
SPT8YLR055C CNM67P53865 581 aaKnown RBP11.8□□□□□ -0.52
SPT8YLR055C SVF1Q05515 481 aa11.8□□□□□ -0.52
SPT8YLR055C TAF10Q12030 206 aa11.8□□□□□ -0.52
SPT8YLR055C TRM11Q12463 433 aa11.8□□□□□ -0.52
SPT8YLR055C ILV6P25605 309 aaKnown RBP11.79□□□□□ -0.52
SPT8YLR055C RAD5P32849 1169 aaPredicted RBP11.79□□□□□ -0.52
SPT8YLR055C RCK2P38623 610 aa11.79□□□□□ -0.52
SPT8YLR055C SMX2P40204 77 aaKnown RBP11.79□□□□□ -0.52
SPT8YLR055C SAP185P40856 1058 aa11.79□□□□□ -0.52
SPT8YLR055C URB2P47108 1174 aa11.79□□□□□ -0.52
SPT8YLR055C BRE5P53741 515 aaKnown RBP11.79□□□□□ -0.52
SPT8YLR055C EEB1Q02891 456 aa11.79□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 221.7 ms