RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W RPS21AP0C0V8 87 aaKnown RBP5.63□□□□□ -1.51
SIR1YKR101W RRP8P38961 392 aaKnown RBP5.63□□□□□ -1.51
SIR1YKR101W NAB3P38996 802 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
SIR1YKR101W PIK1P39104 1066 aa5.63□□□□□ -1.51
SIR1YKR101W ALY2P47029 1046 aa5.63□□□□□ -1.51
SIR1YKR101W HXT6P39003 570 aaKnown RBP5.62□□□□□ -1.51
SIR1YKR101W HXT7P39004 570 aa5.62□□□□□ -1.51
SIR1YKR101W RSC8P43609 557 aaKnown RBP5.62□□□□□ -1.51
SIR1YKR101W YGR153WP48238 217 aa5.62□□□□□ -1.51
SIR1YKR101W SPC105P53148 917 aa5.62□□□□□ -1.51
SIR1YKR101W PBP1P53297 722 aaKnown RBP5.62□□□□□ -1.51
SIR1YKR101W SDH1Q00711 640 aa5.62□□□□□ -1.51
SIR1YKR101W HPF1Q05164 967 aa5.62□□□□□ -1.51
SIR1YKR101W YPR196WQ06595 470 aa5.62□□□□□ -1.51
SIR1YKR101W COQ4O13525 335 aa5.62□□□□□ -1.51
SIR1YKR101W HEM12P32347 362 aaPredicted RBP5.62□□□□□ -1.51
SIR1YKR101W SER1P33330 395 aaKnown RBP5.62□□□□□ -1.51
SIR1YKR101W NIC96P34077 839 aa5.62□□□□□ -1.51
SIR1YKR101W RRT14P40470 206 aa5.62□□□□□ -1.51
SIR1YKR101W RLP7P40693 322 aaKnown RBP5.62□□□□□ -1.51
SIR1YKR101W YVC1Q12324 675 aa5.62□□□□□ -1.51
SIR1YKR101W RMP1Q12530 201 aa5.62□□□□□ -1.51
SIR1YKR101W APA1P16550 321 aaKnown RBP5.61□□□□□ -1.51
SIR1YKR101W TRK2P28584 889 aa5.61□□□□□ -1.51
SIR1YKR101W YKL222CP35995 705 aa5.61□□□□□ -1.51
SIR1YKR101W BIT2P38346 545 aa5.61□□□□□ -1.51
SIR1YKR101W RPN10P38886 268 aaKnown RBP5.61□□□□□ -1.51
SIR1YKR101W RET2P43621 546 aa5.61□□□□□ -1.51
SIR1YKR101W BUD9P53226 547 aa5.61□□□□□ -1.51
SIR1YKR101W HDA1P53973 706 aa5.61□□□□□ -1.51
SIR1YKR101W URA1P28272 314 aaPredicted RBP5.6□□□□□ -1.51
SIR1YKR101W YKR051WP36142 418 aa5.6□□□□□ -1.51
SIR1YKR101W TRZ1P36159 838 aaPredicted RBP5.6□□□□□ -1.51
SIR1YKR101W YHL012WP38709 493 aa5.6□□□□□ -1.51
SIR1YKR101W SBE2P42223 864 aaKnown RBP5.6□□□□□ -1.51
SIR1YKR101W VMS1Q04311 632 aaKnown RBP5.6□□□□□ -1.51
SIR1YKR101W PHM6Q05637 104 aa5.6□□□□□ -1.51
SIR1YKR101W RPS21BQ3E754 87 aaKnown RBP5.6□□□□□ -1.51
SIR1YKR101W Q0142Q9ZZW4 58 aa5.6□□□□□ -1.51
SIR1YKR101W CCZ1P38273 704 aa5.6□□□□□ -1.51
SIR1YKR101W HSL7P38274 827 aa5.6□□□□□ -1.51
SIR1YKR101W TDA3P38758 523 aa5.6□□□□□ -1.51
SIR1YKR101W YAP1801P38856 637 aa5.6□□□□□ -1.51
SIR1YKR101W BOI2P39969 1040 aa5.6□□□□□ -1.51
SIR1YKR101W DOT6P40059 670 aaKnown RBP5.6□□□□□ -1.51
SIR1YKR101W NOG2P53742 486 aaKnown RBP5.6□□□□□ -1.51
SIR1YKR101W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SIR1YKR101W KCC4P25389 1037 aa5.59□□□□□ -1.51
SIR1YKR101W PTP2P29461 750 aa5.59□□□□□ -1.51
SIR1YKR101W DID4P36108 232 aa5.59□□□□□ -1.51
SIR1YKR101W ECM21P38167 1117 aaKnown RBP5.59□□□□□ -1.51
SIR1YKR101W CEP3P40969 608 aa5.59□□□□□ -1.51
SIR1YKR101W SVS1Q12254 260 aa5.59□□□□□ -1.51
SIR1YKR101W NOT3P06102 836 aaKnown RBP5.58□□□□□ -1.52
SIR1YKR101W RPA135P22138 1203 aaKnown RBP5.58□□□□□ -1.52
SIR1YKR101W SFA1P32771 386 aa5.58□□□□□ -1.52
SIR1YKR101W ABZ1P37254 787 aaPredicted RBP5.58□□□□□ -1.52
SIR1YKR101W ENV11P53246 860 aa5.58□□□□□ -1.52
SIR1YKR101W ECM38Q05902 660 aaPredicted RBP5.58□□□□□ -1.52
SIR1YKR101W RSC58Q07979 502 aa5.58□□□□□ -1.52
SIR1YKR101W NKP1Q12493 238 aa5.58□□□□□ -1.52
SIR1YKR101W INO80P53115 1489 aa5.58□□□□□ -1.52
SIR1YKR101W ENA1P13587 1091 aa5.58□□□□□ -1.52
SIR1YKR101W RFA1P22336 621 aaKnown RBP5.58□□□□□ -1.52
SIR1YKR101W SRO9P25567 434 aaKnown RBP5.58□□□□□ -1.52
SIR1YKR101W CYS3P31373 394 aaKnown RBP5.58□□□□□ -1.52
SIR1YKR101W RPD3P32561 433 aa5.58□□□□□ -1.52
SIR1YKR101W ENA2Q01896 1091 aa5.58□□□□□ -1.52
SIR1YKR101W CRR1Q05790 422 aa5.58□□□□□ -1.52
SIR1YKR101W RRP6Q12149 733 aaKnown RBP5.58□□□□□ -1.52
SIR1YKR101W OSW2Q12202 724 aa5.58□□□□□ -1.52
SIR1YKR101W DPH6Q12429 685 aa5.58□□□□□ -1.52
SIR1YKR101W ENA5Q12691 1091 aa5.58□□□□□ -1.52
SIR1YKR101W AI3P03877 415 aa5.57□□□□□ -1.52
SIR1YKR101W COX11P19516 300 aaKnown RBP5.57□□□□□ -1.52
SIR1YKR101W NAM7P30771 971 aaKnown RBP5.57□□□□□ -1.52
SIR1YKR101W WHI3P34761 661 aaKnown RBP5.57□□□□□ -1.52
SIR1YKR101W MNN4P36044 1178 aa5.57□□□□□ -1.52
SIR1YKR101W KTR4P38131 464 aa5.57□□□□□ -1.52
SIR1YKR101W FAT1P38225 669 aa5.57□□□□□ -1.52
SIR1YKR101W YHL041WP38730 149 aa5.57□□□□□ -1.52
SIR1YKR101W MLC2Q06580 163 aa5.57□□□□□ -1.52
SIR1YKR101W YOR059CQ08448 450 aaKnown RBP5.57□□□□□ -1.52
SIR1YKR101W RIB2Q12362 591 aaKnown RBP5.57□□□□□ -1.52
SIR1YKR101W YLR149CQ99296 730 aa5.57□□□□□ -1.52
SIR1YKR101W DIF1O13577 133 aa5.56□□□□□ -1.52
SIR1YKR101W STE13P33894 931 aa5.56□□□□□ -1.52
SIR1YKR101W HFI1Q12060 488 aa5.56□□□□□ -1.52
SIR1YKR101W DCS2Q12123 353 aa5.56□□□□□ -1.52
SIR1YKR101W HAL9Q12180 1030 aa5.56□□□□□ -1.52
SIR1YKR101W YOR022CQ12204 715 aa5.56□□□□□ -1.52
SIR1YKR101W MDL2P33311 773 aa5.56□□□□□ -1.52
SIR1YKR101W HIS6P40545 261 aa5.56□□□□□ -1.52
SIR1YKR101W SKY1Q03656 742 aa5.56□□□□□ -1.52
SIR1YKR101W THI21Q08975 551 aa5.56□□□□□ -1.52
SIR1YKR101W ATP12P22135 325 aa5.55□□□□□ -1.52
SIR1YKR101W DPB3P27344 201 aa5.55□□□□□ -1.52
SIR1YKR101W RPC82P32349 654 aa5.55□□□□□ -1.52
SIR1YKR101W OAF3P36023 863 aa5.55□□□□□ -1.52
SIR1YKR101W EXO84P38261 753 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms