RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C RPN3P40016 523 aaKnown RBP12.92□□□□□ -0.34
SDH1YKL148C TDA9Q04545 1251 aa12.92□□□□□ -0.34
SDH1YKL148C SEY1Q99287 776 aa12.92□□□□□ -0.34
SDH1YKL148C RPB2P08518 1224 aaKnown RBP12.91□□□□□ -0.34
SDH1YKL148C PRP22P24384 1145 aaKnown RBP12.91□□□□□ -0.34
SDH1YKL148C UTP7P40055 554 aaKnown RBP12.91□□□□□ -0.34
SDH1YKL148C SMX2P40204 77 aaKnown RBP12.91□□□□□ -0.34
SDH1YKL148C LCB2P40970 561 aa12.91□□□□□ -0.34
SDH1YKL148C URB2P47108 1174 aa12.91□□□□□ -0.34
SDH1YKL148C PNP1Q05788 311 aa12.91□□□□□ -0.34
SDH1YKL148C RLP24Q07915 199 aaKnown RBP12.91□□□□□ -0.34
SDH1YKL148C PMR1P13586 950 aa12.9□□□□□ -0.34
SDH1YKL148C RAD54P32863 898 aa12.9□□□□□ -0.34
SDH1YKL148C UBP13P38187 747 aa12.9□□□□□ -0.34
SDH1YKL148C GPD2P41911 440 aaKnown RBP12.9□□□□□ -0.34
SDH1YKL148C ATG36P46983 293 aa12.9□□□□□ -0.34
SDH1YKL148C ZPR1P53303 486 aaKnown RBP12.9□□□□□ -0.34
SDH1YKL148C CPR6P53691 371 aaKnown RBP12.9□□□□□ -0.34
SDH1YKL148C CNM67P53865 581 aaKnown RBP12.9□□□□□ -0.34
SDH1YKL148C UTP6Q02354 440 aaKnown RBP12.9□□□□□ -0.34
SDH1YKL148C FRA1Q07825 749 aa12.9□□□□□ -0.34
SDH1YKL148C SNF1P06782 633 aaKnown RBP12.9□□□□□ -0.35
SDH1YKL148C ADH4P10127 382 aa12.9□□□□□ -0.35
SDH1YKL148C ESS1P22696 170 aa12.9□□□□□ -0.35
SDH1YKL148C YCR051WP25631 222 aa12.9□□□□□ -0.35
SDH1YKL148C TRZ1P36159 838 aaPredicted RBP12.9□□□□□ -0.35
SDH1YKL148C ECM2P38241 364 aaKnown RBP12.9□□□□□ -0.35
SDH1YKL148C RRT2P38332 387 aa12.9□□□□□ -0.35
SDH1YKL148C RIX1P38883 763 aaPredicted RBP12.9□□□□□ -0.35
SDH1YKL148C SPC72P39723 622 aa12.9□□□□□ -0.35
SDH1YKL148C CRF1Q04930 467 aa12.9□□□□□ -0.35
SDH1YKL148C WHI4Q07655 649 aaKnown RBP12.9□□□□□ -0.35
SDH1YKL148C DIP2Q12220 943 aaPredicted RBP12.9□□□□□ -0.35
SDH1YKL148C TIF5P38431 405 aaKnown RBP12.89□□□□□ -0.35
SDH1YKL148C TIF4631P39935 952 aaKnown RBP12.89□□□□□ -0.35
SDH1YKL148C SOL4P53315 255 aa12.89□□□□□ -0.35
SDH1YKL148C ARK1P53974 638 aa12.89□□□□□ -0.35
SDH1YKL148C TIM8P57744 87 aa12.89□□□□□ -0.35
SDH1YKL148C KIN4Q01919 800 aa12.89□□□□□ -0.35
SDH1YKL148C ADA2Q02336 434 aa12.89□□□□□ -0.35
SDH1YKL148C CUR1Q06469 252 aa12.89□□□□□ -0.35
SDH1YKL148C ARD1P07347 238 aaPredicted RBP12.88□□□□□ -0.35
SDH1YKL148C KRS1P15180 591 aaKnown RBP12.88□□□□□ -0.35
SDH1YKL148C GCD6P32501 712 aaKnown RBP12.88□□□□□ -0.35
SDH1YKL148C YME1P32795 747 aa12.88□□□□□ -0.35
SDH1YKL148C EXO5P38289 585 aa12.88□□□□□ -0.35
SDH1YKL148C EAF6P47128 113 aa12.88□□□□□ -0.35
SDH1YKL148C SPT2P06843 333 aaPredicted RBP12.88□□□□□ -0.35
SDH1YKL148C ARG1P22768 420 aa12.88□□□□□ -0.35
SDH1YKL148C PLC1P32383 869 aa12.88□□□□□ -0.35
SDH1YKL148C SUV3P32580 737 aa12.88□□□□□ -0.35
SDH1YKL148C INA22P40576 216 aa12.88□□□□□ -0.35
SDH1YKL148C YMR1P47147 688 aaKnown RBP RIP-Chip data12.88□□□□□ -0.35not detected
SDH1YKL148C MTG1Q03151 367 aaPredicted RBP12.88□□□□□ -0.35
SDH1YKL148C PHR1P05066 565 aaKnown RBP RIP-Chip data12.87□□□□□ -0.35not detected
SDH1YKL148C CTT1P06115 562 aa12.87□□□□□ -0.35
SDH1YKL148C POL3P15436 1097 aa12.87□□□□□ -0.35
SDH1YKL148C KIP1P28742 1111 aa12.87□□□□□ -0.35
SDH1YKL148C SEC21P32074 935 aaKnown RBP12.87□□□□□ -0.35
SDH1YKL148C PDB1P32473 366 aaKnown RBP12.87□□□□□ -0.35
SDH1YKL148C ALD6P54115 500 aaKnown RBP12.87□□□□□ -0.35
SDH1YKL148C TAF9Q05027 157 aa12.87□□□□□ -0.35
SDH1YKL148C TAF10Q12030 206 aa12.87□□□□□ -0.35
SDH1YKL148C HIF1Q12373 385 aa12.87□□□□□ -0.35
SDH1YKL148C NCA2Q12374 616 aa12.87□□□□□ -0.35
SDH1YKL148C TFC4P33339 1025 aa12.86□□□□□ -0.35
SDH1YKL148C UBP11P36026 717 aa12.86□□□□□ -0.35
SDH1YKL148C MMS21P38632 267 aa12.86□□□□□ -0.35
SDH1YKL148C VHR2P40041 505 aa12.86□□□□□ -0.35
SDH1YKL148C NCS2P53923 493 aaPredicted RBP12.86□□□□□ -0.35
SDH1YKL148C YDR278CQ05612 105 aa12.86□□□□□ -0.35
SDH1YKL148C CDC33P07260 213 aaKnown RBP12.86□□□□□ -0.35
SDH1YKL148C STV1P37296 890 aa12.86□□□□□ -0.35
SDH1YKL148C KEL1P38853 1164 aaKnown RBP12.86□□□□□ -0.35
SDH1YKL148C PGK1P00560 416 aaKnown RBP12.85□□□□□ -0.35
SDH1YKL148C KAR3P17119 729 aa12.85□□□□□ -0.35
SDH1YKL148C HEL1P36113 551 aa12.85□□□□□ -0.35
SDH1YKL148C LIF1P53150 421 aa12.85□□□□□ -0.35
SDH1YKL148C PHM6Q05637 104 aa12.85□□□□□ -0.35
SDH1YKL148C YDL206WQ12424 762 aa12.85□□□□□ -0.35
SDH1YKL148C ERG12P07277 443 aa12.84□□□□□ -0.35
SDH1YKL148C YSC83P32792 385 aa12.84□□□□□ -0.35
SDH1YKL148C PBP2P38151 413 aaKnown RBP RIP-Chip data12.84□□□□□ -0.35not detected
SDH1YKL148C PHO88P38264 188 aaPredicted RBP12.84□□□□□ -0.35
SDH1YKL148C FIS1P40515 155 aa12.84□□□□□ -0.35
SDH1YKL148C YML119WQ03208 357 aa12.84□□□□□ -0.35
SDH1YKL148C DON1Q05610 365 aa12.84□□□□□ -0.35
SDH1YKL148C ACM1Q08981 209 aa12.84□□□□□ -0.35
SDH1YKL148C EUG1P32474 517 aa12.84□□□□□ -0.35
SDH1YKL148C SWH1P35845 1188 aa12.84□□□□□ -0.35
SDH1YKL148C RPC37P36121 282 aa12.84□□□□□ -0.35
SDH1YKL148C NCL1P38205 684 aaKnown RBP12.84□□□□□ -0.35
SDH1YKL148C END3P39013 349 aa12.84□□□□□ -0.35
SDH1YKL148C RPL22BP56628 122 aaKnown RBP12.84□□□□□ -0.35
SDH1YKL148C SLX4Q12098 748 aa12.84□□□□□ -0.35
SDH1YKL148C RKM4Q12504 494 aa12.84□□□□□ -0.35
SDH1YKL148C SPO16P17122 198 aa12.83□□□□□ -0.36
SDH1YKL148C SRV2P17555 526 aaKnown RBP12.83□□□□□ -0.36
SDH1YKL148C GAL11P19659 1081 aa12.83□□□□□ -0.36
SDH1YKL148C DBP5P20449 482 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 85.9 ms