RNA–Protein interactions for RNA: YKL086W

SRX1, Transcript of Sulfiredoxin, yeast

Gene SRX1, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRX1	YKL086W	YGR237C	P50089	785 aa		18.94	■□□□□ 0.62
SRX1	YKL086W	ORC5	P50874	479 aa		18.94	■□□□□ 0.62
SRX1	YKL086W	MCM6	P53091	1017 aa	Known RBP	18.94	■□□□□ 0.62
SRX1	YKL086W	CDC53	Q12018	815 aa	Known RBP	18.94	■□□□□ 0.62
SRX1	YKL086W	ADE4	P04046	510 aa	Known RBP	18.93	■□□□□ 0.62
SRX1	YKL086W	GLN3	P18494	730 aa		18.93	■□□□□ 0.62
SRX1	YKL086W	YHL026C	P38740	315 aa		18.93	■□□□□ 0.62
SRX1	YKL086W	UTP14	Q04500	899 aa	Known RBP	18.93	■□□□□ 0.62
SRX1	YKL086W	YOL075C	Q08234	1294 aa		18.93	■□□□□ 0.62
SRX1	YKL086W	TIF1	P10081	395 aa	Known RBP	18.92	■□□□□ 0.62
SRX1	YKL086W	SHS1	Q07657	551 aa		18.92	■□□□□ 0.62
SRX1	YKL086W	TOM70	P07213	617 aa	Known RBP	18.91	■□□□□ 0.62
SRX1	YKL086W	MAK16	P10962	306 aa	Predicted RBP	18.91	■□□□□ 0.62
SRX1	YKL086W	MMS4	P38257	691 aa		18.91	■□□□□ 0.62
SRX1	YKL086W	HCR1	Q05775	265 aa	Known RBP	18.91	■□□□□ 0.62
SRX1	YKL086W	COX4	P04037	155 aa		18.9	■□□□□ 0.62
SRX1	YKL086W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	18.9	■□□□□ 0.62	not detected
SRX1	YKL086W	TAF13	P11747	167 aa		18.9	■□□□□ 0.62
SRX1	YKL086W	MUD1	P32605	298 aa	Known RBP	18.9	■□□□□ 0.62
SRX1	YKL086W	ESL1	P40456	1118 aa		18.9	■□□□□ 0.62
SRX1	YKL086W	ASN1	P49089	572 aa	Known RBP	18.9	■□□□□ 0.62
SRX1	YKL086W	MLH2	Q07980	695 aa		18.9	■□□□□ 0.62
SRX1	YKL086W	ADE17	P38009	592 aa	Known RBP	18.89	■□□□□ 0.61
SRX1	YKL086W	LCB2	P40970	561 aa		18.89	■□□□□ 0.61
SRX1	YKL086W	GFD1	Q04839	188 aa	Known RBP	18.89	■□□□□ 0.61
SRX1	YKL086W	YPR117W	Q06116	2489 aa		18.89	■□□□□ 0.61
SRX1	YKL086W	CDC37	P06101	506 aa	Known RBP	18.88	■□□□□ 0.61
SRX1	YKL086W	MSD1	P15179	658 aa	Known RBP	18.88	■□□□□ 0.61
SRX1	YKL086W	VMA1	P17255	1071 aa	Known RBP	18.88	■□□□□ 0.61
SRX1	YKL086W	ROX1	P25042	368 aa		18.88	■□□□□ 0.61
SRX1	YKL086W	SLX1	P38324	304 aa		18.88	■□□□□ 0.61
SRX1	YKL086W	ISM1	P48526	1002 aa		18.88	■□□□□ 0.61
SRX1	YKL086W	HSH155	P49955	971 aa	Known RBP	18.88	■□□□□ 0.61
SRX1	YKL086W	CHS2	P14180	963 aa		18.87	■□□□□ 0.61
SRX1	YKL086W	RPT1	P33299	467 aa	Known RBP	18.87	■□□□□ 0.61
SRX1	YKL086W	CSE2	P33308	149 aa		18.87	■□□□□ 0.61
SRX1	YKL086W	NPP2	P39997	493 aa		18.87	■□□□□ 0.61
SRX1	YKL086W	DON1	Q05610	365 aa		18.87	■□□□□ 0.61
SRX1	YKL086W	YLR455W	Q06188	304 aa		18.87	■□□□□ 0.61
SRX1	YKL086W	OPT1	P40897	799 aa		18.86	■□□□□ 0.61
SRX1	YKL086W	AIP1	P46680	615 aa	Known RBP	18.86	■□□□□ 0.61
SRX1	YKL086W	TIM8	P57744	87 aa		18.86	■□□□□ 0.61
SRX1	YKL086W	YVH1	Q02256	364 aa	Known RBP	18.86	■□□□□ 0.61
SRX1	YKL086W	CWC21	Q03375	135 aa	Known RBP	18.86	■□□□□ 0.61
SRX1	YKL086W	EBS1	Q03466	884 aa	Known RBP	18.86	■□□□□ 0.61
SRX1	YKL086W	RLP24	Q07915	199 aa	Known RBP	18.86	■□□□□ 0.61
SRX1	YKL086W	LAA1	P39526	2014 aa		18.86	■□□□□ 0.61
SRX1	YKL086W	MRC1	P25588	1096 aa		18.85	■□□□□ 0.61
SRX1	YKL086W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	18.85	■□□□□ 0.61	not detected
SRX1	YKL086W	ALG11	P53954	548 aa	Known RBP	18.85	■□□□□ 0.61
SRX1	YKL086W	YOR022C	Q12204	715 aa		18.85	■□□□□ 0.61
SRX1	YKL086W	PRR1	P28708	518 aa		18.84	■□□□□ 0.61
SRX1	YKL086W	UBP5	P39944	805 aa		18.84	■□□□□ 0.61
SRX1	YKL086W	BUD16	P39988	312 aa		18.84	■□□□□ 0.61
SRX1	YKL086W	GIR2	Q03768	265 aa	Predicted RBP	18.84	■□□□□ 0.61
SRX1	YKL086W	EMI2	Q04409	500 aa	Known RBP	18.84	■□□□□ 0.61
SRX1	YKL086W	COG4	Q06096	861 aa		18.84	■□□□□ 0.61
SRX1	YKL086W	YAP7	Q08182	245 aa		18.84	■□□□□ 0.61
SRX1	YKL086W	TFC8	Q12308	588 aa		18.84	■□□□□ 0.61
SRX1	YKL086W	RPL4A	P10664	362 aa	Known RBP	18.83	■□□□□ 0.6
SRX1	YKL086W	RSA4	P25382	515 aa	Known RBP	18.83	■□□□□ 0.6
SRX1	YKL086W	TRM2	P33753	639 aa		18.83	■□□□□ 0.6
SRX1	YKL086W	YER186C	P40101	306 aa		18.83	■□□□□ 0.6
SRX1	YKL086W	RPL4B	P49626	362 aa	Known RBP	18.83	■□□□□ 0.6
SRX1	YKL086W	YLR422W	Q06409	1932 aa		18.82	■□□□□ 0.6
SRX1	YKL086W	ATE1	P16639	503 aa		18.82	■□□□□ 0.6
SRX1	YKL086W	APN2	P38207	520 aa		18.82	■□□□□ 0.6
SRX1	YKL086W	OSH2	Q12451	1283 aa		18.82	■□□□□ 0.6
SRX1	YKL086W	SSB1	P11484	613 aa	Known RBP	18.81	■□□□□ 0.6
SRX1	YKL086W	MRPL7	P36519	292 aa		18.81	■□□□□ 0.6
SRX1	YKL086W	SSB2	P40150	613 aa	Known RBP	18.81	■□□□□ 0.6
SRX1	YKL086W	SPT2	P06843	333 aa	Predicted RBP	18.8	■□□□□ 0.6
SRX1	YKL086W	ADK2	P26364	225 aa		18.8	■□□□□ 0.6
SRX1	YKL086W	YKR023W	P36119	530 aa	Known RBP	18.8	■□□□□ 0.6
SRX1	YKL086W	DNL4	Q08387	944 aa	Predicted RBP	18.8	■□□□□ 0.6
SRX1	YKL086W	PUS1	Q12211	544 aa	Known RBP	18.8	■□□□□ 0.6
SRX1	YKL086W	ULI1	P43604	169 aa		18.79	■□□□□ 0.6
SRX1	YKL086W	FAL1	Q12099	399 aa	Known RBP	18.79	■□□□□ 0.6
SRX1	YKL086W	YET1	P35723	206 aa		18.78	■□□□□ 0.6
SRX1	YKL086W	HEL1	P36113	551 aa		18.78	■□□□□ 0.6
SRX1	YKL086W	PSY4	P38193	441 aa		18.78	■□□□□ 0.6
SRX1	YKL086W	FMP10	P40098	244 aa		18.78	■□□□□ 0.6
SRX1	YKL086W	MET13	P53128	600 aa		18.78	■□□□□ 0.6
SRX1	YKL086W	YGR130C	P53278	816 aa		18.78	■□□□□ 0.6
SRX1	YKL086W	SPO75	Q07798	868 aa		18.78	■□□□□ 0.6
SRX1	YKL086W	SGT2	Q12118	346 aa	Known RBP	18.78	■□□□□ 0.6
SRX1	YKL086W	ASP3-2	P0CX77	362 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	ASP3-3	P0CX78	362 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	ASP3-4	P0CX79	362 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	ASP3-1	P0CZ17	362 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	FTR1	P40088	404 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	COS5	P47187	383 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	SSL2	Q00578	843 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	PNG1	Q02890	363 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	ESC8	Q08119	714 aa		18.77	■□□□□ 0.6
SRX1	YKL086W	PRC1	P00729	532 aa		18.76	■□□□□ 0.59
SRX1	YKL086W	NAT1	P12945	854 aa	Known RBP	18.76	■□□□□ 0.59
SRX1	YKL086W	RPC25	P35718	212 aa		18.76	■□□□□ 0.59
SRX1	YKL086W	YHR202W	P38887	602 aa		18.76	■□□□□ 0.59
SRX1	YKL086W	XDJ1	P39102	459 aa		18.76	■□□□□ 0.59

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms