RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	HFD1	Q04458	532 aa		3.83	□□□□□ -1.8
TMA108	YIL137C	ISR1	Q06098	443 aa	Known RBP	3.83	□□□□□ -1.8
TMA108	YIL137C	LCB5	Q06147	687 aa	Known RBP	3.83	□□□□□ -1.8
TMA108	YIL137C	SGT2	Q12118	346 aa	Known RBP	3.83	□□□□□ -1.8
TMA108	YIL137C	TIF6	Q12522	245 aa	Known RBP	3.83	□□□□□ -1.8
TMA108	YIL137C	CPA2	P03965	1118 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	CDC9	P04819	755 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	RPS6A	P0CX37	236 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	RPS6B	P0CX38	236 aa	Predicted RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	VBA3	P25594	458 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	LYP1	P32487	611 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	AFR1	P33304	620 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	HXT6	P39003	570 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	HXT7	P39004	570 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	NTA1	P40354	457 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	VTC4	P47075	721 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	PRO2	P54885	456 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	MSH6	Q03834	1242 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	CUE5	Q08412	411 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	SEC23	P15303	768 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	PRP5	P21372	849 aa	Predicted RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	SER1	P33330	395 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	EAP1	P36041	632 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	PCM1	P38628	557 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	YIL166C	P40445	542 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	SKP2	P42843	763 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	YLR225C	Q05948	407 aa	Known RBP	3.82	□□□□□ -1.8
TMA108	YIL137C	RAV1	P47104	1357 aa		3.82	□□□□□ -1.8
TMA108	YIL137C	APN1	P22936	367 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
TMA108	YIL137C	SIT1	P39980	628 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	CCT5	P40413	562 aa	Known RBP	3.81	□□□□□ -1.8
TMA108	YIL137C	RRT6	P53117	311 aa	Predicted RBP	3.81	□□□□□ -1.8
TMA108	YIL137C	CNM67	P53865	581 aa	Known RBP	3.81	□□□□□ -1.8
TMA108	YIL137C	ECM9	Q02202	377 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	APC5	Q08683	685 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	TMA46	Q12000	345 aa	Known RBP	3.81	□□□□□ -1.8
TMA108	YIL137C	REX3	Q12090	404 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	GYP5	Q12344	894 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	CFT1	Q06632	1357 aa	Known RBP	3.81	□□□□□ -1.8
TMA108	YIL137C	BCK1	Q01389	1478 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	RRP43	P25359	394 aa	Predicted RBP	3.81	□□□□□ -1.8
TMA108	YIL137C	VMA3	P25515	160 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	ARE1	P25628	610 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	YEL1	P34225	687 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	MDJ1	P35191	511 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	RIM4	P38741	713 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	CIT3	P43635	486 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	SUT1	P53032	299 aa	Known RBP	3.81	□□□□□ -1.8
TMA108	YIL137C	CAF120	P53836	1060 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	NOG1	Q02892	647 aa	Known RBP	3.81	□□□□□ -1.8
TMA108	YIL137C	ERO1	Q03103	563 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	RAD33	Q04231	177 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	ADY3	Q07732	790 aa		3.81	□□□□□ -1.8
TMA108	YIL137C	BI4	P03879	638 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	PDC1	P06169	563 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	GLK1	P17709	500 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	AEP2	P22136	580 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	SRO9	P25567	434 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	YKL133C	P36066	463 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	BIT2	P38346	545 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	UBP6	P43593	499 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	SET2	P46995	733 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	PEX21	P50091	288 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	ATP22	P50273	684 aa	Predicted RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	YGL140C	P53120	1219 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	PIL1	P53252	339 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
TMA108	YIL137C	YDR338C	Q05497	695 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	PRP9	P19736	530 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	HOP1	P20050	605 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	SFL1	P20134	766 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
TMA108	YIL137C	HSM3	P38348	480 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	GZF3	P42944	551 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	YJR098C	P47139	656 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	ERV25	P54837	211 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	RAT1	Q02792	1006 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	SPC19	Q03954	165 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	ESC8	Q08119	714 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	NBA1	Q08229	501 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	SNF1	P06782	633 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	RPS21A	P0C0V8	87 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	DBP3	P20447	523 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	IRE1	P32361	1115 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	IME2	P32581	645 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	PIM1	P36775	1133 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	ECM2	P38241	364 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	CKB2	P38930	258 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	RAD55	P38953	406 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	NPR2	P39923	615 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	PRP42	Q03776	544 aa	Known RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	KEL3	Q08979	651 aa	Predicted RBP	3.8	□□□□□ -1.8
TMA108	YIL137C	TRM8	Q12009	286 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	YOL114C	Q12322	202 aa		3.8	□□□□□ -1.8
TMA108	YIL137C	MRP7	P12687	371 aa		3.79	□□□□□ -1.8
TMA108	YIL137C	NCP1	P16603	691 aa	Known RBP	3.79	□□□□□ -1.8
TMA108	YIL137C	MSN1	P22148	382 aa		3.79	□□□□□ -1.8
TMA108	YIL137C	TPD3	P31383	635 aa		3.79	□□□□□ -1.8
TMA108	YIL137C	DLD1	P32891	587 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms